Azospirillum thermophilum: DEW08_06040
Help
Entry
DEW08_06040 CDS
T05917
Name
(GenBank) MBL fold hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
azz
Azospirillum thermophilum
Pathway
azz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEW08_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azz03019
]
DEW08_06040
Messenger RNA biogenesis [BR:
azz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DEW08_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RNase_J_C
RMMBL
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AWK85785
UniProt:
A0A2S2CMW1
LinkDB
All DBs
Position
1:complement(1345513..1347177)
Genome browser
AA seq
554 aa
AA seq
DB search
MPDLEDGGLYFLPLGGSGEIGMNLNLYAHRGKWLMVDLGISFADDTMPGLDVIMPDPSFI
AQRRGDLLGLVLTHAHEDHLGAVQYLWPELRCPVYCTPFTAAVLRAKLHERGLAGTVPIH
EIPLGGALEIGPFAIEFVTVTHSIPEPNALAIRTAAGTVLHTGDWKLDPEPLIGRTADEE
RLRQIGDEGVLALVGDSTNALVPGSSGSEATVRKALTGLIGQHPDVRVAVSCFATNVARL
ESIAAAAAEHGRHVALVGRSLWRINEAARANGYLADLPAFLTEHDANYVPRDKLVLICTG
SQGEPRSALARIAAGDHPQISLERDDVVIFSSREIPGNERDIGRMQNQLVGRGIRLITAE
DAPVHVSGHPAKDELVRMYQWVRPHIAVPVHGEQRHQQEHARLALSCQVPEALVPANGEL
IRLGPGGPAQVVATVQAGRMAVDGKRLVPLDTGLMRTRNRMVHNGAAVVTLVVNGRGDLV
TAPQVALMGLVDEVADRDLLLDVVDAVREAVASLPRSVRAEDAPVKEAARIAVRRFFNAS
HGKKPVTDVHLVRV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacctggaggacggcggcctgtatttcctgccgctcggcgggtcgggcgagatc
ggcatgaacctcaacctctacgcccaccgcggcaagtggctgatggtcgatctcggcatc
tccttcgccgacgacaccatgcccggcctggacgtgatcatgcccgatccgtccttcatc
gcgcagcggcgcggcgacctgctcggcctcgtgctgacgcacgcgcatgaggaccatctc
ggcgccgtccagtatctgtggccggagctgcgctgcccggtctactgcacgcccttcacc
gccgcggtcctgcgggccaagctgcacgagcgcgggctggccggcacggtgccgatccac
gagatcccgctgggcggcgcgctggagatcggtcccttcgccatcgagttcgtcaccgtc
acccactcgatcccggagccgaacgccctggcgatccgcaccgcggccggcaccgtcctg
cacaccggcgactggaagctcgatccggagccgctgatcggccgcacggcggacgaggag
cggctgcgccagatcggcgacgagggggtgctggcgctggtcggcgacagcaccaacgcg
ctggtccccggcagttcggggtcggaggcgacggtgcgcaaggcgctgaccgggctgatc
ggccagcatcccgacgtgcgggtggcggtgagctgcttcgccaccaacgtggcgcggctg
gagagcattgcggcggcggcggccgagcatggccgccacgtcgcgctggtcggccggtcg
ctgtggcggatcaacgaggcggcgcgggccaacggctacctcgccgacctgccggccttc
ctgaccgagcatgacgccaactacgttccgcgcgacaagctggtgctgatctgcaccggc
agccagggcgagccgcgctcggcgctcgcccgcatcgccgccggcgaccacccgcagatc
tcgctggaacgggatgacgtggtgatcttctcctcccgcgagatccccggcaacgagcgc
gacatcggccgcatgcagaaccagctcgtcgggcgcggcatccggctgatcacggcggag
gatgcgccggtccatgtctccggccacccggcgaaggacgaactggtgcgcatgtaccag
tgggtgcgcccgcatatcgccgtgccggtccatggcgagcagcgccaccagcaggagcat
gcccggctggccctgtcctgccaggtgccggaggcgctggtcccggccaacggcgagctg
atccggctcggtcccggcgggccggcgcaggtggtggcgacggtgcaggccggccgcatg
gcggtggacggcaagcggctggtgccgctcgacaccggcctgatgcgcacgcgcaaccgc
atggtccacaacggcgccgccgtggtcacgctggtggtgaacgggcgcggtgatctggtg
accgcgccgcaggtggcgctgatggggctggtggacgaggtcgccgaccgcgacctgctg
ctggacgtggtggatgccgtgcgcgaggcggtggcgtcgctgccccggtcggtccgggcg
gaggacgcgccggtgaaggaggccgcgcgcatcgccgtgcgccgcttcttcaacgcctcc
cacggaaagaagccggtcaccgacgtgcatctcgtccgcgtctga
DBGET
integrated database retrieval system