KEGG   Azospirillum thermophilum: DEW08_06040
Entry
DEW08_06040       CDS       T05917                                 
Name
(GenBank) MBL fold hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
azz  Azospirillum thermophilum
Pathway
azz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:azz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DEW08_06040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:azz03019]
    DEW08_06040
Messenger RNA biogenesis [BR:azz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DEW08_06040
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B Lactamase_B_2 RNase_J_C RMMBL GGDEF_2
Other DBs
NCBI-ProteinID: AWK85785
UniProt: A0A2S2CMW1
LinkDB
Position
1:complement(1345513..1347177)
AA seq 554 aa
MPDLEDGGLYFLPLGGSGEIGMNLNLYAHRGKWLMVDLGISFADDTMPGLDVIMPDPSFI
AQRRGDLLGLVLTHAHEDHLGAVQYLWPELRCPVYCTPFTAAVLRAKLHERGLAGTVPIH
EIPLGGALEIGPFAIEFVTVTHSIPEPNALAIRTAAGTVLHTGDWKLDPEPLIGRTADEE
RLRQIGDEGVLALVGDSTNALVPGSSGSEATVRKALTGLIGQHPDVRVAVSCFATNVARL
ESIAAAAAEHGRHVALVGRSLWRINEAARANGYLADLPAFLTEHDANYVPRDKLVLICTG
SQGEPRSALARIAAGDHPQISLERDDVVIFSSREIPGNERDIGRMQNQLVGRGIRLITAE
DAPVHVSGHPAKDELVRMYQWVRPHIAVPVHGEQRHQQEHARLALSCQVPEALVPANGEL
IRLGPGGPAQVVATVQAGRMAVDGKRLVPLDTGLMRTRNRMVHNGAAVVTLVVNGRGDLV
TAPQVALMGLVDEVADRDLLLDVVDAVREAVASLPRSVRAEDAPVKEAARIAVRRFFNAS
HGKKPVTDVHLVRV
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgcctgacctggaggacggcggcctgtatttcctgccgctcggcgggtcgggcgagatc
ggcatgaacctcaacctctacgcccaccgcggcaagtggctgatggtcgatctcggcatc
tccttcgccgacgacaccatgcccggcctggacgtgatcatgcccgatccgtccttcatc
gcgcagcggcgcggcgacctgctcggcctcgtgctgacgcacgcgcatgaggaccatctc
ggcgccgtccagtatctgtggccggagctgcgctgcccggtctactgcacgcccttcacc
gccgcggtcctgcgggccaagctgcacgagcgcgggctggccggcacggtgccgatccac
gagatcccgctgggcggcgcgctggagatcggtcccttcgccatcgagttcgtcaccgtc
acccactcgatcccggagccgaacgccctggcgatccgcaccgcggccggcaccgtcctg
cacaccggcgactggaagctcgatccggagccgctgatcggccgcacggcggacgaggag
cggctgcgccagatcggcgacgagggggtgctggcgctggtcggcgacagcaccaacgcg
ctggtccccggcagttcggggtcggaggcgacggtgcgcaaggcgctgaccgggctgatc
ggccagcatcccgacgtgcgggtggcggtgagctgcttcgccaccaacgtggcgcggctg
gagagcattgcggcggcggcggccgagcatggccgccacgtcgcgctggtcggccggtcg
ctgtggcggatcaacgaggcggcgcgggccaacggctacctcgccgacctgccggccttc
ctgaccgagcatgacgccaactacgttccgcgcgacaagctggtgctgatctgcaccggc
agccagggcgagccgcgctcggcgctcgcccgcatcgccgccggcgaccacccgcagatc
tcgctggaacgggatgacgtggtgatcttctcctcccgcgagatccccggcaacgagcgc
gacatcggccgcatgcagaaccagctcgtcgggcgcggcatccggctgatcacggcggag
gatgcgccggtccatgtctccggccacccggcgaaggacgaactggtgcgcatgtaccag
tgggtgcgcccgcatatcgccgtgccggtccatggcgagcagcgccaccagcaggagcat
gcccggctggccctgtcctgccaggtgccggaggcgctggtcccggccaacggcgagctg
atccggctcggtcccggcgggccggcgcaggtggtggcgacggtgcaggccggccgcatg
gcggtggacggcaagcggctggtgccgctcgacaccggcctgatgcgcacgcgcaaccgc
atggtccacaacggcgccgccgtggtcacgctggtggtgaacgggcgcggtgatctggtg
accgcgccgcaggtggcgctgatggggctggtggacgaggtcgccgaccgcgacctgctg
ctggacgtggtggatgccgtgcgcgaggcggtggcgtcgctgccccggtcggtccgggcg
gaggacgcgccggtgaaggaggccgcgcgcatcgccgtgcgccgcttcttcaacgcctcc
cacggaaagaagccggtcaccgacgtgcatctcgtccgcgtctga

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