Azospirillum thermophilum: DEW08_07045
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Entry
DEW08_07045 CDS
T05917
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
azz
Azospirillum thermophilum
Pathway
azz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEW08_07045 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azz03021
]
DEW08_07045 (rho)
03019 Messenger RNA biogenesis [BR:
azz03019
]
DEW08_07045 (rho)
Transcription machinery [BR:
azz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DEW08_07045 (rho)
Messenger RNA biogenesis [BR:
azz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DEW08_07045 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
AWK86039
UniProt:
A0A2S2CNL9
LinkDB
All DBs
Position
2:complement(213363..214619)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLQELKCKSPAELLAFAEELQIENASTLRKQDMMFAILKQLAENDIPIYGDGVLEVLQD
GFGFLRSPEANYLPGPDDIYVSPSQVRRFGLRTGDTVEGQIRAPKDGERYFALLKVNTIN
FDAPDKVRHRINFDNLTPLYPEERLRMEVEDPTKKNLTGRIIDLVAPLGKGQRGLIVAPP
RTGKTVMLQNIAHSIATNHPEAYLIVLLIDERPEEVTDMARSVRGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKLSDKRTFPAIDI
SKSGTRKEELLVDKGTMSKMWILRRILMPMGVTDAVDFLVDKLKHTKSNSEFFESMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaagagctgaagtgcaagagccccgccgaactcctggcgttcgcggaggaa
ctgcagatcgagaatgccagtaccctgcgcaagcaggacatgatgttcgccatcctgaag
cagcttgccgagaacgacatcccgatctacggcgacggcgtgctcgaggtgctgcaggac
ggcttcggcttcctgcgctcgccggaggccaactacctgcccggccccgacgacatctac
gtcagccccagccaggtgcgccgcttcggcctgcgcaccggcgacacggtggaaggtcag
atccgggcgcccaaggacggcgagcgctacttcgccctgctcaaggtcaacaccatcaac
ttcgatgcgccggacaaggtccgccaccgcatcaacttcgacaacctgaccccgctctat
ccggaggagcggctgcgcatggaggtcgaggatccgaccaagaagaacctgaccggccgg
atcatcgatctggtcgccccgctcggcaaggggcagcgcgggctgatcgtggcgccgccg
cgcaccggcaagacggtgatgctgcagaacatcgcccactcgatcgccaccaaccatccc
gaggcctacctgatcgtcctgctgatcgacgagcggccggaggaggtgaccgacatggcg
cgcagcgtgcgcggcgaggtcatcagctccaccttcgacgagccggcgacccgccacgtc
caggtggcggagatggtgatcgagaaggccaagcgcctggtcgagcacaagcgcgacgtg
gtcatcctgctggattccatcacccgcctggcgcgcgcctacaacacggtggtgccgagc
tccggcaaggtgctgaccggcggcgtcgacgccaacgcgctgcagcggcccaagcgcttc
ttcggcgccgcccgcaacgtggaggagggcggctcgctgaccatcatcgccaccgcgctg
atcgacaccggcagccgcatggacgaggtgatcttcgaggagttcaagggcaccggcaac
tccgagatcgtgctggaccgcaagctctccgacaagcgcaccttcccggccatcgacatc
tccaagtcgggcacccgcaaggaggagctgctggtcgacaagggcaccatgtcgaagatg
tggatcctgcgccgcatcctcatgccgatgggcgtcaccgacgcggtcgacttcctggtc
gacaagctcaagcacaccaagagcaattccgagttcttcgagagcatgaaccagtag
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