Azospirillum thermophilum: DEW08_07685
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Entry
DEW08_07685 CDS
T05917
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
azz
Azospirillum thermophilum
Pathway
azz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEW08_07685 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azz03019
]
DEW08_07685 (pnp)
03016 Transfer RNA biogenesis [BR:
azz03016
]
DEW08_07685 (pnp)
Enzymes [BR:
azz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DEW08_07685 (pnp)
Messenger RNA biogenesis [BR:
azz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DEW08_07685 (pnp)
Transfer RNA biogenesis [BR:
azz03016
]
Prokaryotic type
tRNA degradation factors
DEW08_07685 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AWK86148
UniProt:
A0A2S2CNW0
LinkDB
All DBs
Position
2:337959..340070
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AA seq
703 aa
AA seq
DB search
MFKVYRKEIEWGGRKLTFETGRIARQADGAVLVTYGETTVLCTAVAAKSPKPGVDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPTEKETLVSRLIDRPIRPLFADGFRNETQVICTVLSH
DLENDADIVSMVGTSAALTLSGIPFLGPIGAARVGYVDGEYVLNPTMDAIEGSALDLVVA
GTTEGVLMVESEAKELTEEVMLGAVMFGHKNFQPVIQAIIDLAEECAKEPWDLPEPAYDR
AALKAKLRETVGADVEAAYTETVKQVRYEKIGAAKAKAVEALAESFEAQAIASEFKELEA
DILRGAVLKTGRRIDGRDTKTVRPIVSEVGVLPRAHGSALFTRGETQALVVTTLGTTQDE
QIIDALEGEYREHFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPLLPSKEEFP
YTLRVVSEVTESNGSSSMATVCGSSLSLMDAGAPLPRPVAGIAMGLIKEDTGFAVLSDIL
GDEDHLGDMDFKVAGTEKGVTALQMDIKITSITEEIMKIALAQAKDGRLHILGEMAKALT
GAREGVNENAPRITVITIPKEKIRDVIGSGGKVIREIVEQTGAKIDIEDDGTVKVSAVDQ
KKSDAAIDWIKGIVAEPELNVVYTGKVVKVVDFGAFVNFLGSRDGLVHISELAQQRVGKV
SDVVKQGDEVKVKVIGFDDRGKVKLSMKQVDQATGEDLTKKAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagtctaccgtaaagaaatcgagtggggcgggcgcaagctgacgttcgagacg
ggcaggatcgcccgtcaggccgacggtgccgttctggtcacctatggcgagactaccgtc
ctgtgcacggccgtcgccgccaagtcgccgaagccgggcgtcgatttcttccctctgacg
gtcaactaccaggagaaggccttcgcggcgggcaagatccccggcggcttcttcaagcgt
gaaggccgcccgaccgagaaggagacgctggtcagccgtctgatcgaccggccgatccgt
ccgctcttcgccgacggcttccgcaacgagacccaggtcatctgcaccgtgctgagccac
gacctggagaacgacgcggacatcgtgtcgatggtcggcacctcggccgccctcaccctg
tcgggcatccccttcctgggtccgatcggcgccgcccgcgtcggctatgtcgacggcgag
tatgtgctgaacccgaccatggacgccatcgagggctcggcgctcgacctcgtcgtcgcc
ggcaccaccgaaggcgtgctgatggtcgagtcggaagccaaggagctgaccgaggaggtc
atgctcggcgccgtcatgttcggccacaagaacttccagccggtcatccaggcgatcatc
gacctcgccgaggaatgcgccaaggagccgtgggacctgccggagccggcctacgaccgc
gccgccctcaaggcgaagctgcgcgagaccgtcggcgccgacgtcgaggcggcctacacc
gagacggtgaagcaggtccgctacgagaagatcggcgccgccaaggccaaggcggtcgag
gcgctggccgagtccttcgaggcccaggcgatcgcctccgagttcaaggagctcgaggcc
gacatcctgcgcggcgcggtgctgaagaccggccgccgcatcgacggccgtgacaccaag
accgtccgcccgatcgtgtccgaggtcggcgtgctgccgcgcgcccacggttccgccctg
ttcacccgcggcgagacgcaggccctggtggtcaccacgctcggcaccacccaggacgag
cagatcatcgacgcgctggaaggcgagtaccgcgagcacttcatgctccactacaacttc
ccgccctactcggtgggcgaggccggccgcatgggctcgccgggccgccgcgagatcggc
cacgggaagctggcgtggcgcgccatccacccgctgctgccgtcgaaggaagagttcccc
tacacgctgcgcgtggtgtcggaagtcacggagtccaacggctcctcctcgatggcgacg
gtctgcggctcgtcgctgtcgctgatggacgccggcgctccgctgccccgtccggtggcc
ggcatcgccatgggcctgatcaaggaagacaccggcttcgccgtcctgtcggacatcctg
ggtgacgaggatcacctgggcgacatggacttcaaggtggccggcaccgagaagggcgtc
acggcgctgcagatggacatcaagatcacctcgatcaccgaggagatcatgaagatcgcg
ctcgcccaggccaaggacggccgcctgcacatcctcggcgagatggcgaaggccctcacc
ggcgcccgcgagggtgtcaacgagaacgccccgcgcatcaccgtcatcaccatcccgaag
gagaagatccgcgacgtgatcggctccggcggcaaggtgatccgcgagatcgtcgagcag
accggcgccaagatcgacatcgaggacgacggcaccgtcaaggtgtcggcggtcgaccag
aagaagtcggacgccgccatcgactggatcaagggcatcgtcgccgagccggaactgaac
gtggtctataccggcaaggtcgtgaaggtcgtcgatttcggcgccttcgtgaacttcctg
ggctcgcgcgacggcctcgtccacatctccgagctggcgcagcagcgcgtcggcaaggtg
tcggacgtcgtcaagcagggcgacgaggtgaaggtcaaggtcatcggcttcgacgaccgc
ggcaaggtcaagctgtcgatgaagcaggtcgaccaggccaccggcgaggacctgaccaag
aaggccgagtaa
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integrated database retrieval system
