Bacillus sp. ABP14: BGI23_18340
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Entry
BGI23_18340 CDS
T11093
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
baap Bacillus sp. ABP14
Brite
KEGG Orthology (KO) [BR:
baap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baap03032
]
BGI23_18340
03400 DNA repair and recombination proteins [BR:
baap03400
]
BGI23_18340
Enzymes [BR:
baap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BGI23_18340
DNA replication proteins [BR:
baap03032
]
Prokaryotic type
DNA Topoisomerases
BGI23_18340
DNA repair and recombination proteins [BR:
baap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BGI23_18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
SAND
Toprim_3
Toprim_2
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AOY17128
LinkDB
All DBs
Position
complement(3560732..3562810)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPSKAKTIEKYLGKKYKVVASMGHVRDLPKSQMGIEVKNNFTPKYITIRGK
GPVLKDLKSAAKKAKKVYLAADPDREGEAIAWHLANTLNVDVESDCRVVFNEITKDAIKE
SFKHPRAINMNLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIERER
EIQSFEPEEFWTIKTEFVKGKDTFEASFYGVDGEKVQLTNETQVNEIIERLKDNAFSVEN
VTRKERKRNPALPFTTSSLQQEAARKLNMRAKKTMMLAQQLYEGIDLGKQGTVGLITYMR
TDSTRISETAQTEARTYITEAFGTEYIGTEKKKETKKSNAQDAHEAIRPTSVMRKPEELK
SFLSRDQLRLYKLIWERFVASQMASAIMDTVTARLINNNVQFRSSGSVVKFPGFMKVYVE
SKDDGAEEKDKMLPPLEVGETVFSKDLEPKQHFTQPPPRYTEARLVRTLEELGIGRPSTY
VPTLETIQKRGYVGLDNKRFVPTELGEIVIELILEFFPEIINIEFTANMEQSLDEVEEGN
ANWVKIVDDFYVGFEPRLEKAEKEMREVEIKDEPAGEDCELCNHPMVFKMGKYGKFMACS
NFPDCRNTKPIVKEIGVTCPKCDKGQIIERRSNKKKRLFYGCGTYPECDFVSWDKPIGRK
CPKCEGMLVEKKLKKGVQVQCISCDYEEEQQM
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacctcgtaatcgtggagtcgccttctaaggcgaagaccattgagaaatat
ttagggaaaaaatacaaagttgtcgcgtctatgggacacgttcgcgatttacctaaaagc
caaatggggatagaagtaaagaacaacttcaccccgaagtatattaccattcgtggtaaa
ggtcccgtcttaaaagacttaaaatcagcagcaaaaaaagcaaagaaagtctatctcgcg
gccgatccagaccgcgaaggggaagctattgcttggcatttagccaatacgttaaatgtg
gacgttgaatcagattgccgagttgtgtttaatgagattacaaaagatgcaataaaagaa
tcattcaaacatcctcgcgcgattaacatgaatttagtagatgcacaacaagcaagacgt
atactagatcgtcttgttggttacaatattagtcctttattatggaagaaagtaaaaaaa
ggattaagtgcaggacgcgtacaatctgtagcagttcgtttaattatcgaacgtgaaaga
gaaatacaaagtttcgagcctgaagaattctggacaattaagacagaatttgtgaaaggg
aaagacacatttgaagcaagcttttacggtgtagatggtgaaaaagttcaattaacgaat
gaaacacaagtgaatgaaataattgaacggctgaaagataatgcgttctcagttgaaaat
gtaacgcgaaaagagcgaaaacgtaatccagcattaccatttacaacatcttccttgcaa
caagaggcggcgcgtaagttaaacatgcgagcaaagaaaacgatgatgcttgcgcagcaa
ttgtatgaaggaattgatcttggaaaacaaggaactgtaggtcttattacgtatatgaga
actgattcaacacgtatctcagaaacagctcaaacagaggcacgtacgtacattactgag
gcgtttggtacggaatacataggaacagaaaagaagaaagaaacgaagaagtcgaacgca
caagatgcgcatgaggcaattcgtcctacttcggtaatgagaaagccagaggaactaaag
agtttcttaagtcgtgaccaacttcgattgtataaattgatttgggagcgatttgttgca
agtcaaatggcgtctgctataatggatactgtgacagcgagactcattaataataatgtt
cagttccgttcaagtggatcggttgtaaagttcccaggatttatgaaagtgtatgtagag
tcgaaagatgatggggctgaagaaaaggataagatgttgccacctttagaagtaggggaa
accgtattttcgaaggatttagaaccgaagcaacactttacacaacctccgccgcgctat
acagaggctcgtttagtaagaacacttgaagagcttggaattggaagaccgtcgacttac
gtaccgacacttgaaacgattcaaaaacgtggatatgtaggtttggataataaacgcttc
gttccaactgaactaggtgaaatagtaattgaacttattttagagtttttcccggaaatt
attaacattgaatttactgctaacatggagcaaagcctcgatgaagtagaagaaggaaat
gcgaattgggtaaaaattgttgatgatttctacgtaggatttgaaccgcgtttagaaaaa
gcggaaaaagaaatgcgtgaagtggaaattaaagatgaaccagctggggaagattgtgaa
ttatgtaatcacccaatggtctttaaaatgggtaaatacgggaaatttatggcttgctcg
aatttcccagattgtcgtaatacaaaaccgattgtgaaagaaatcggtgttacttgtccg
aaatgtgataaaggtcaaattattgaacgtcgtagtaataaaaagaaacgtcttttctat
gggtgcggtacgtatccagagtgtgactttgtatcttgggataagccgattggccgtaaa
tgtccgaagtgtgaaggtatgctagtagagaagaagttgaaaaagggcgtacaagtacaa
tgtatttcgtgtgattatgaagaagaacaacaaatgtga
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