Bacillus sp. ABP14: BGI23_22165
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Entry
BGI23_22165 CDS
T11093
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
baap Bacillus sp. ABP14
Pathway
baap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
baap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BGI23_22165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baap03400
]
BGI23_22165
Enzymes [BR:
baap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BGI23_22165
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BGI23_22165
DNA repair and recombination proteins [BR:
baap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BGI23_22165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AOY17886
LinkDB
All DBs
Position
complement(4259463..4260293)
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AA seq
276 aa
AA seq
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MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGETIENIKRRGK
FLLLYVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTDGTELHYKDVRKFGTMHLF
KKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTKRKIKVVLLDQRLLVGLGNIYVDEV
LFRSQIHPEREASSLTAEEIERIYEATVTTLGEAVKRGGSTIRTYINSQGQIGSFQELLN
VYGKKGEPCVTCGTILEKTVVGGRGTHYCPICQPRI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaacgtcagacggacacttgaaaatcttgtaacagga
aaaacgattgaagatgttattgttacttatcccaaaatcgtgaaacgaccggatgatgca
gaaatctttaaagaaatgctaaaaggcgagacgattgaaaatataaagcgaaggggaaag
tttttgcttttatatgtaacaaattatgtcattgtttcacatttgcgtatggaaggtaag
tttttactgcatcaagaggatgagccaattgataagcatacgcacgtccgtttcttattt
acagatggaactgaattacattataaagatgtgagaaagtttggtacgatgcatctcttt
aaaaaaggtgaggaaatgaatcaaatgcctcttgctgacttaggtccggagccatttgat
gctgaattgacaccacagtatttacaagagagattgcaaaagacaaagcgtaaaataaaa
gttgtattattagaccagcgtcttttagtaggacttggaaatatatatgtagatgaagtt
ttattccgttctcaaattcatccagaacgagaagcatcatctttaacagcagaagaaatt
gagcgaatttatgaggcgactgttacaacgttaggcgaagcagtgaagcgtggcggaagt
acaattcgaacgtatatcaactcacaagggcaaattggctcattccaagaactgctaaat
gtatatggaaaaaaaggagaaccgtgtgtgacttgcggtacgatattagaaaaaacagtt
gttggtggaagaggaacgcattactgcccaatttgtcagccaagaatatag
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