Bacillus sp. ABP14: BGI23_25975
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Entry
BGI23_25975 CDS
T11093
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
baap Bacillus sp. ABP14
Pathway
baap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGI23_25975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baap03021
]
BGI23_25975
03019 Messenger RNA biogenesis [BR:
baap03019
]
BGI23_25975
Transcription machinery [BR:
baap03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BGI23_25975
Messenger RNA biogenesis [BR:
baap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BGI23_25975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOY18611
LinkDB
All DBs
Position
complement(4963162..4964433)
Genome browser
AA seq
423 aa
AA seq
DB search
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFAILKARAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDDPESAKERVHFPALTPLYPDRQMKLETEPKKLPTRIMDLIAPVGFGQRGLIVAPPKA
GKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVEGFLRKLRQTKTNEEFLQNIVADSKRYV
TTK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcaattgcagcattagaaaacatgaaattaaaagagttatacgagcttgcg
aaagaatttaaaatttcgtattatagcaaattaacgaaaaaagagttaatcttcgccatt
ttaaaagctcgagcagaaaaagaaggtttcttcttcatggaaggcgtattagaaattatt
caatcagaaggatttggattcctacgtcctatcaactactctccaagctcagaagatatt
tatatctcagcttcgcaaattcgtcgtttcgatttacgtaatggagataaggtttctggt
aaagtacgacctccgaaagaaaatgaacgctactttgggttattacaagttgaagctgta
aacggagatgatccagagtcagcaaaagagcgtgtgcatttccctgcattaacaccatta
tacccagatcgccaaatgaaattggaaacggaaccgaaaaagttaccgacacgcatcatg
gatttaattgcaccagttggatttggacaacgtggtttaattgtcgcgcctccaaaggct
ggtaaaactagtctattaaaagaaatcgcacacagtgttacaacaaatcatccggaagct
gaattaattgtccttttaattgatgagcgtccagaggaagtaacagatattgaacgttct
gttaaaggagatgttgtaagctctacttttgatgaagtaccagaaaatcatattaaagta
gcagaacttgtgttagaacgtgcaatgcgtcttgtagagcacaaaaaagatgttatcatt
ttaatggatagtattacccgtttagcgcgagcttacaaccttgttattccgccaagtggt
agaacattatcgggtggtatcgacccagctgccttccatagaccgaagcgtttctttgga
gctgcacgtaatatcgaagaaggcggtagcttaacaattttagcaacagctcttgttgat
acaggatctcgtatggacgatgtaatttacgaagaatttaaaggaactggaaatatggaa
cttcatttagatcgttcattagctgagcgtcgtatcttcccggcaattgatattcgccgt
tctggtacacgtaaagaggatctattaattccgaaagaacatttagacaagctatggggt
attcgtaaaacaatgcgtgatacaccagactttgttgaaggtttcttacgtaaacttcgt
caaacaaagacaaatgaagaatttttacaaaacattgttgcagattcgaaaagatatgta
acaacgaagtaa
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