Bacillus sp. A260: GD442_00635
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Entry
GD442_00635 CDS
T11424
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
baaz Bacillus sp. A260
Pathway
baaz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GD442_00635 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baaz03021
]
GD442_00635 (rpoC)
03400 DNA repair and recombination proteins [BR:
baaz03400
]
GD442_00635 (rpoC)
Enzymes [BR:
baaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GD442_00635 (rpoC)
Transcription machinery [BR:
baaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GD442_00635 (rpoC)
DNA repair and recombination proteins [BR:
baaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GD442_00635 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QGY33410
LinkDB
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Position
117186..120797
Genome browser
AA seq
1203 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMVFKDANEALLAYQNGYVHLHTRVAVA
ASAVNNATFTEEQKSMLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAKYFVEKGA
NIKEIIASREEVAPFSKKILGNIIAEVFKRFQITETSRMLDRMKNLGFKYSTKAGITVGV
SDILVLGEKDEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLY
DRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCK
KCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVTPGQPISHG
KELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVS
DAGETDVLPGTLLDIHQFTDANAKVLLQGKQPATARPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDDMNVENDEVY
VEQ
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcacctgacaagatt
cgttcttggtcatacggtgaagttaagaaaccagaaactattaactatcgtacgttaaag
cctgaaaaagatggcttattctgtgagcgtattttcggaccacaaaaggactgggaatgt
cattgcggaaaatacaaacgtgtacgttataaaggtgtagtttgtgatcgatgtggcgtt
gaagtaacgcgtgcaaaagtacgtcgtgaacgtatgggtcatatcgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattactttctgaaaaagaataccgtgcatatcgtgat
cgatatggtagcacattccaagctgctatgggtgcagaagcaattaaaaagctactacaa
gacatcgatttagataaagaagtagacttcttaaaagaagaattaaaaacagcacaagga
caacgccgtactcgtgctattaaacgtctagaagtattagaagcattccgtaactctgga
aatgaaccgtcttggatgatcttagatgttctaccagtaatcccaccagaactacgccca
atggtacagttagacggtggacgttttgctacttctgacttaaacgacttataccgtcgt
gtaattaaccgtaacaaccgtttaaaacgtctattggacttaggtgcaccaagcatcatt
gttcaaaacgaaaaacgtatgttacaagaagctgtagacgcattaatcgataatggtcgt
cgtggccgtccagttactgggccaggtaaccgtccattaaaatcactatctcacatgctt
aaaggtaaacaaggacgtttccgtcaaaacttattaggtaaacgtgttgactactctggt
cgttctgtaatcgttgtaggaccgaacttaaagatgtatcaatgtggattgccaaaagaa
atggcgcttgaactgttcaaacctttcgtaatgaaagagttagttgaaaaaggattagca
cataacattaagagtgcgaaacgtaaaatcgagcgtgtacaacctgaagtttgggacgtt
ttagagtctgtgattaaagaacatccagtacttctaaaccgcgcaccaacacttcaccgt
cttggtatccaggcgtttgaacctacattagtagaaggtcgcgcaatccgtcttcaccca
cttgtatgtactgcatacaacgcggactttgacggtgaccaaatggccgttcacgtacct
ttatcatcagaagctcaagctgaagctcgtcttcttatgttagcggcacaaaacatcttg
aacccgaaagacggtaaaccagttgttactccatctcaggatatggtattaggtaactat
tacttaacacttgagcgtgaaggtgcaatcggtgaaggtatggtcttcaaagatgcaaac
gaagcattgcttgcatatcaaaatggatatgttcatcttcatacacgtgttgcagtagct
gcaagtgcagtaaacaacgcaacatttactgaagagcaaaagagtatgcttctattaaca
acagttggtaaattaatatttaacgaaatcttaccagagtcgttcccttatattaatgaa
ccaacaaattcaaaccttgaaaaagaaacaccagcgaaatatttcgttgaaaaaggtgcg
aacattaaagaaattattgctagtcgcgaagaagtggcgccatttagcaagaagatcctt
ggtaacatcattgcggaagtgttcaaacgtttccaaattacagaaacgtctcgcatgctt
gaccgtatgaaaaacttaggattcaagtactctacaaaagctggtattacagttggggta
tctgacattcttgtattaggcgaaaaagatgaaattctccacgaagcacaagcaaaagta
gataatgtaattaaacaattccgtcgcggtttaatcacggaagaagaacgttacgatcgc
gttatctctatttggagtaatgcaaaagatgttatccaaggaaaactgatgaaatccttg
aataaacgcaacccaatcttcatgatgagtgactcaggtgcccgtggtaacgcatctaac
tttactcagcttgctggtatgcgtggtcttatggccaatccatctggtcgtatcatcgaa
cttccaatcaaatcgagtttccgtgaaggtttaacagtacttgagtacttcatctctacg
catggtgcgcgtaaaggtcttgccgatacagcacttaaaactgccgattctggttactta
acacgtcgtcttgttgacgttgcacaagatgtaatcgttcgtgaagatgattgtggaaca
gatcgcggtttattaattggtgcgattaaagagggtaatgaagttatcgagtcattatat
gatcgtcttgttggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaagta
ttagttgctgaaaatcaattaattactgaagatatcgctcatatcgttgaaaattcgggt
gttgaaactgtaaacattcgttcagcgtttacgtgtaacactcgccacggtgtatgtaag
aagtgttacggtcgtaacttagcaactggaacagacgtagaagtaggagaagcggtaggt
attatcgcagctcaatctatcggtgagccaggtacacagttaacgatgcgtacattccat
acaggtggggttgccggagatgatattactcaaggtttacctcgtatccaagagatcttc
gaagctcgtaatccgaaaggtcaggcagttatcagtgaaatcgacggtgttatcgcagcg
atcaacgacgttaaagatcgccaagaagtagttgtacagggtgaagttgaagctcgtacg
tatgctattccttacggtgctcgtctgaaagtaactccaggacagccaattagccacggt
aaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacattacg
gcggttcaagaatacttattacgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggtgacaaacacgtagaggtaatggtacgtcaaatgttacgtaaagttcgtgtaagt
gatgcaggtgaaacagatgtattaccaggaacattactagatatccatcagtttactgat
gcgaatgctaaggtcttactgcaaggtaagcaaccagcaacagctagacctgttctactt
ggtattacaaaagcttcacttgaaacagattcattcttatctgcagcatcgttccaagaa
acaactcgtgtcttaactgatgcagcaattaagggtaaacgcgatgaacttctaggatta
aaagaaaatgttattatcggtaaacttgttcctgctggaacaggtatgaatcgttatcgc
aaagtggatcttgtaaaaacaacacaagatgacatgaacgtagaaaacgatgaggtttat
gtggaacagtaa
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