Bacillus sp. A260: GD442_06050
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Entry
GD442_06050 CDS
T11424
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
baaz Bacillus sp. A260
Pathway
baaz03420
Nucleotide excision repair
baaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
baaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GD442_06050
03430 Mismatch repair
GD442_06050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baaz03400
]
GD442_06050
Enzymes [BR:
baaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GD442_06050
DNA repair and recombination proteins [BR:
baaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GD442_06050
MMR (mismatch excision repair)
Other MMR factors
GD442_06050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QGY34379
LinkDB
All DBs
Position
complement(1180789..1182855)
Genome browser
AA seq
688 aa
AA seq
DB search
MTQEKFSQKSLTHADIPRATYHIPKTSTHLIMEEDVDAAYFRALEQQNVFLNEKQLEAVR
TTEGPVLTLAGAGSGKTSVLTTRVGYLVNVKQVHPRNILLLTFTQKAAEEIRSRVAKLPG
MNHAASSYVVAGTFHSVFLKLLRSQGYNQQILANEKHKQIMIKKILKELRLKDDYDAETM
LAMISLEKNKLNRPKDVKAKTPVEQEFKEVYERFEEVKQRYNYIDFDDILLETYYMLENN
APLLTQLQQRFHYIEVDEFQDTSYAQYEIVKLLATPRNNLFIAGDDDQAIYGWRGASHQI
ILSFPKEFDNTTIIALNTNYRSNPFIVGLGNEVIKLNQERFDKELYSVREEGVQPFYARP
ATTLDEANQILQLIQEKVDSGDRNYKDFCLLYRTHSVSRSLLDQLTIHKIPFIKHGASQS
FYEHSLIKPVLDHLRLVIEPFRLESLSNILPTMYIGRDDCISFIEREQWKYGEGRFPSLL
HFLLLNPSLKPFQVKKVNERIDFIKFIKELEPKKALKEIIHGKGKYLEYLQSNDRSSFTM
HKDIQEEMLEELLESATRFTDIPAYLQFIDEAIQGQKEMEALKTMPQKDAVSLMSIHNAK
GLEFPCVFLLGASDGILPHTSSLKDANDRVTETSEALEEERRLLYVAITRAKEELYISSP
QFFRGKKLDISRFLYTVRKDLPEKTSTK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaaaaattttcacaaaaatcgttaacacacgctgatattccgcgtgcgaca
tatcatattccgaaaacatctacccatttaattatggaagaagatgtagacgcggcttat
ttccgcgctcttgaacaacaaaatgtttttttaaacgaaaaacaattagaagccgtgcgc
acaacagaaggtcctgttcttacactagctggtgctggaagcgggaaaacatcggtttta
acaactcgcgttggttatttagtaaatgtaaaacaagttcatccacgaaatattttatta
cttacatttacacaaaaagcagctgaagaaatccgaagtcgtgttgcgaagttaccaggt
atgaatcatgcagcaagtagctacgttgttgctggtacattccactctgttttcttaaaa
ttacttcgtagtcaaggttataatcagcaaattttagcaaatgaaaaacataaacaaatt
atgataaagaaaatcttaaaagaattgcgtttaaaagacgattatgatgcggaaacgatg
ctcgcgatgatttcacttgagaaaaacaaattaaatcgtccgaaagatgtaaaagcgaaa
acaccagtggaacaagaatttaaagaagtatatgaacgttttgaagaggtaaaacaacga
tacaattatattgatttcgatgacatcttattggaaacatattacatgttagaaaataat
gctcctttactaactcaattacaacaacggtttcactacattgaagtagatgagtttcaa
gatacatcctatgcacaatatgaaattgtaaaattgttagccacgccaagaaataatttg
ttcatcgcaggtgatgatgatcaagcaatttatggctggcgaggggcaagtcaccaaatt
attttatcttttccaaaagaatttgataacacaacaatcattgccctaaatacgaattat
cgatccaatccctttatcgtcgggcttggaaatgaagttataaaattaaatcaagaacgt
tttgataaagagctatactccgttcgtgaggaaggtgtacaacctttttatgcaagacct
gctacgactcttgatgaagcaaatcaaattttgcagctcattcaagaaaaagtagatagc
ggtgaccgaaactataaagatttttgtttactgtatcgcacacattctgtaagtcgttcg
ttacttgatcagcttaccattcataaaatcccgtttattaaacacggggcgagccaatca
ttttatgaacattctttaattaagcctgtattagatcatttaagactcgtgattgagccg
tttcgactagaatcactttcaaacatattgccgacgatgtatatcggacgtgatgattgt
atttcatttattgaacgtgaacaatggaaatatggtgaggggcgcttcccttctcttctt
catttcttactattaaatccaagcttaaaaccttttcaagtgaaaaaggtaaatgagcgc
atcgattttattaagtttattaaagaattagaaccgaaaaaagcattaaaagaaatcatt
catggtaaaggaaaatatttagagtacttacaaagtaacgatcgttcttcctttacgatg
cataaagacatacaagaagaaatgttggaagaattactggagtctgcaactcgtttcacc
gatattccagcttatttacaatttattgacgaggcgattcaaggtcaaaaagaaatggaa
gcattaaaaacaatgccgcaaaaagatgccgtttcacttatgtcaatccataacgcaaaa
ggccttgaatttccatgtgtctttttacttggagcgagtgatggaatcctgccccacact
tcttctttaaaagatgcaaatgatcgtgttacggaaacttctgaagcgttagaagaagaa
cgccgattactgtatgtcgccattacacgtgcgaaagaagaactttatatttcttctccg
caatttttcagaggaaagaaattagatatatctcgttttttatatactgtgcgaaaagat
ttacctgaaaagacatccactaaataa
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