Bacillus sp. A260: GD442_21560
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Entry
GD442_21560 CDS
T11424
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
baaz Bacillus sp. A260
Pathway
baaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GD442_21560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baaz03400
]
GD442_21560
Enzymes [BR:
baaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GD442_21560
DNA repair and recombination proteins [BR:
baaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GD442_21560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
DEAD
AAA
T2SSE
AAA_16
nSTAND3
AAA_12
AAA_28
AAA_29
TsaE
NPHP3_N
DUF4926
AAA_17
Zeta_toxin
HHH_5
UvrD_C
Rad17
NTPase_1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QGY37352
LinkDB
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Position
complement(4239885..4242221)
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AA seq
778 aa
AA seq
DB search
MGNQHAMDLFEEEKKFIKAQVLHTIFHNEENLYSVVSMKVIETNETYDEKKVMINGHFPR
MHEDEVFTLTGHFKDHPKYGKQYMVETFKKELPQTKAGMVQYLASDLFKGIGKRTAEKIV
DHLGEHAISKIMDDPEALNGVVNKQKAQEIYETIVEHQGLEKVMSFLNGYGFGTKLSIKI
YQQYKEMTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHDDRVRAGCFYTLENVS
LQLGHVYMRKDQLVRETMSLLNNQEGRVTEEDIIGCIETMQSEGKVIIEEERVYLATLFY
SEKGVVKSIRRLMNQEETPSFPEAEVLKTLGEIEEQLNVQYAPFQQEAIQTALHKPMMLL
TGGPGTGKTTVIKGIVEMYASLHGLSLNPNEYSDDNPFPILLTAPTGRAAKRMSESTGLP
ACTIHRLLGWTPEGSFQRNETDPVQGKLLIIDEFSMVDIWLANQLFKSLPTNIQVIVVGD
EDQLPSVGPGQVLKDLLNAGAVPTVKLTEIYRQAEGSSVIQLAHAIKNGTLPPDLAQNKK
DRSFISCTGAQIVEVVKKVCENAKTKGFSARDVQVLAPMYRGPAGINVLNEALQQVFNPK
REKSKEIAYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIVSVFYAKENVEQQDMIIVSFD
GIEVTYTKPDLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKF
LIICGEEAAFQSGVNRLDDAMRQTTLASRLQESQGEVQMVTVNGEEMDVENISPYDFM
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcaacatgcaatggatttgtttgaggaagagaaaaagtttataaaagcgcaa
gttcttcataccattttccacaacgaagaaaacctctattccgttgtcagtatgaaagtc
attgaaacgaatgaaacgtatgacgaaaagaaagtaatgataaacggtcattttccccgc
atgcatgaagatgaagtgtttacattgactggtcattttaaggaccatccaaagtatgga
aaacaatatatggttgaaacatttaaaaaagaattgccgcaaacaaaagcaggtatggtg
caatatttagcgagtgatttatttaaagggataggaaagcgtacagctgaaaaaattgtg
gaccatctcggagaacatgctatttctaaaattatggatgaccctgaggcattaaatggt
gttgttaataaacaaaaggctcaggaaatatatgagacaattgttgaacatcaaggatta
gagaaagtaatgagctttttaaatggctacggttttggaacgaaactttctattaagatt
taccagcaatataaagagatgacattagaagtgattcgtaataatccgtatcaacttatt
gaagaagtggacgggattggttttggaagagcggatgatatagggcgtgcgttagggata
tcgggtaatcatgacgaccgtgtacgagcgggatgtttttacacattagagaatgtctca
ttacaacttggtcatgtttatatgaggaaagatcaacttgtaagagaaacgatgtcactt
ttaaacaatcaagaaggaagagtgactgaggaagatattataggttgtattgaaacgatg
caaagtgaagggaaagtcatcatagaagaagaacgagtgtatttagcgacgttattctac
tctgaaaaaggtgttgtaaagtctattcgcaggcttatgaatcaagaagaaacaccttca
tttccagaagcggaagtgttaaaaacgttaggtgaaattgaagaacaactgaacgtacaa
tatgcaccgtttcagcaagaagcaattcaaacggcacttcataaaccgatgatgttatta
acaggtggaccaggaacagggaaaacaacagttattaaagggattgttgaaatgtatgcg
tcacttcacggattatcgttaaatccgaatgaatacagtgatgataatccatttccaata
ctattaacagctccaacaggaagagcagcgaagcggatgagtgaatcgacaggacttcca
gcttgcacaattcaccgtttacttggttggacgccagaaggatctttccagcgtaatgaa
acggatcctgtccaaggtaagctccttattatcgatgaattttcaatggttgatatttgg
cttgcaaatcagctatttaagtcgttgccgacgaatattcaagttatcgttgtaggtgat
gaagatcagttgccatctgtaggacctggacaagtattaaaagatttattaaatgcaggc
gcagttccgacagtgaagcttactgaaatttatcgtcaagcggaaggctcatcagtgatt
caacttgcccatgcgataaaaaatggaactctaccaccagatttagcgcaaaacaaaaaa
gatcgttcgtttatcagctgtacaggggctcaaattgttgaggttgtgaaaaaagtttgc
gaaaatgctaaaacaaaaggctttagtgcaagggatgttcaagtattagcaccgatgtac
cgcgggcctgctggtattaatgtattaaacgaagcgctgcaacaagtatttaatccgaag
agggaaaagagtaaagaaattgcttacggtgatgttgtgtaccgaagaggtgataaagta
ctgcaactcgtgaatcagccggagagccaagtgtttaatggtgatattggggaaattgtt
tcggtgttttatgcaaaagaaaacgttgagcaacaagatatgattatcgtttcatttgat
ggaattgaggtaacgtatacgaagcccgatttaaatcaaattacgcatgcatattgttgt
tccattcataaatcacaaggtagtgaatttccgattgttattatgccaatcgtgaaaagt
tacaaccgtatgttacgtcgtaatttaatttacacgggtattacaagaagtaagaagttc
cttattatttgcggggaggaagcagctttccaatctggtgtaaatcgccttgatgatgca
atgcgtcaaacaactttagctagtcgcttgcaagaatcacaaggagaagtacagatggtc
acagttaatggcgaggaaatggacgtggaaaacatttcaccgtatgatttcatgtaa
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