Bacillus sp. A260: GD442_25030
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Entry
GD442_25030 CDS
T11424
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
baaz Bacillus sp. A260
Pathway
baaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GD442_25030 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baaz03019
]
GD442_25030 (rnr)
03016 Transfer RNA biogenesis [BR:
baaz03016
]
GD442_25030 (rnr)
Enzymes [BR:
baaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GD442_25030 (rnr)
Messenger RNA biogenesis [BR:
baaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GD442_25030 (rnr)
Transfer RNA biogenesis [BR:
baaz03016
]
Prokaryotic type
tRNA degradation factors
GD442_25030 (rnr)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QGY38001
LinkDB
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Position
complement(4910058..4912484)
Genome browser
AA seq
808 aa
AA seq
DB search
MEEIIQEHIDKLLLFMREEAYKPLTIQELEEAFGIEGSEGFKDFVKALVTMEEKGLVIRT
RSNRYGLPEKMNLIRGKLIGHARGFAFVVPDEKKTGDDDLFIPPTELNGALHGDTVLARL
SSQSSGSRQEGSIVRILERGTKELVGTYTESKNFGFVIPDNKRWTSDIFILKSASMGAVE
GHKVVVKITSYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLAFPEEVMEHANSV
PETISEEDLKDRRDLRDQMIVTIDGADAKDLDDAVTVTKLENGNYKLGVHIADVSHYVQE
GSPIDVEAAERATSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINNLGDVVKH
EIFQSVIKTTERMTYADVRSILEDEDEELIKRYEPLVPMFKEMGQLAQILREKRMRRGAI
DFDFKEAKVLVDEEGKPTDVVMRDRSVSEKLIEEFMLVANETVAEHFHWMNVPFMYRVHE
DPKEDKLERFFEFVTNFGYAVKGRANEVHPRALQQILEMVQGQPEEVVISTVMLRSMKQA
RYDADSLGHFGLSTEFYTHFTSPIRRYPDTIVHRLIREYIINGKVDNETQAKWREKLPEI
AEHSSNMERRAVEAERETDEMKKAEYMVDKIGEEYDGMISSVTNFGLFVELPNTIEGLVH
VSYLTDDYYRYDEQHFAMIGERTGNVFRIGDEITIRVINVNKDERAIDFEIVGMKGTPRR
KFKDRPVVIEQPRTGRKKRGGRSERSNERGGERGTGRKFDRGGKGKGRGSASASASASQP
GKKDGNGKKKKAFFENVPGFKKKKKKRK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaatcatacaagaacatattgataagttgttattatttatgagagaagaagcg
tataaaccgctaacgatacaagagttagaagaggcatttgggattgaaggttctgagggc
tttaaagatttcgtaaaggcacttgtaacgatggaagaaaagggacttgttattcgtact
cgtagcaaccgttacggtcttcctgaaaagatgaatttaatacgcggtaagttaattgga
catgcacgtggttttgcattcgttgtaccagatgagaagaaaacgggagacgatgacctt
ttcataccgcctacagaattaaacggtgcgcttcatggcgatacagtattagcacgcctt
agttcccaatcgagtggttcgcgtcaagaaggttcaattgtacgcattttagaacgcgga
acgaaagagttagttggtacatatacagaatcgaaaaactttggatttgttatacctgat
aataagcgctggacgagtgatatctttatcttgaaaagcgcatcaatgggtgctgtagaa
ggtcataaagtagttgtgaaaattacgagctatccagagaatcgtttaagcgcagaaggt
gaagttattcaaattctaggtcataaaaatgatccaggagtagatattttatctgtcatt
cataaacatcatttacctttagcgttccctgaggaagtgatggagcatgcaaacagtgta
ccagaaacgatttcagaagaagatttaaaagatcgccgcgacctgcgtgatcaaatgatc
gtaacgattgatggtgcagatgcgaaagacttagatgatgctgttacagtaacgaagctt
gaaaatggtaactacaagcttggcgttcacattgcggacgtaagtcattacgttcaagaa
ggttctccaattgatgttgaagcagcggaaagagcgacgagtgtgtatcttgttgaccgt
gtaattccgatgattccacatcgtctatctaacggtatttgttcattaaatccgaaagta
gaccgtctgacattatcttgtgaaatggaaatcaacaacttaggtgatgttgttaaacac
gagattttccaaagtgtaattaaaacgacagagcgtatgacgtatgctgacgtaagaagc
attttagaagatgaggacgaagagttaattaagcgttatgagccattagtaccgatgttt
aaagagatgggccaattggcacaaattttacgtgaaaaacgtatgcgccgtggtgcaatt
gactttgactttaaagaggcgaaagtattagtggatgaagaaggaaaaccgacagacgtt
gtcatgcgcgatcgttctgtatcagagaagttaattgaagaatttatgcttgttgcgaat
gaaacagtagcagagcacttccactggatgaacgtaccattcatgtaccgtgtccatgaa
gatccgaaagaagataagcttgagcgtttcttcgagtttgtaacgaacttcggatatgca
gtaaaaggacgtgcgaatgaagtgcatcctcgcgcgctacaacaaattcttgaaatggtt
caaggacagccagaagaagtagttatttcaacagttatgcttcgttctatgaagcaagct
cgttacgatgcggatagtttaggacatttcggtttatcaactgagttctacacacacttc
acatcaccaattcgtcgttacccagatacaatcgttcatagattaattcgtgaatacatt
attaacggtaaagtcgacaacgaaacgcaagcaaaatggcgtgaaaaattacctgagatt
gcagagcattcttctaatatggaacgtcgtgctgttgaagcagagcgtgaaacagatgag
atgaaaaaagcagagtatatggttgataagatcggtgaagagtatgacggtatgattagc
tctgtaacaaacttcggtttattcgtagagcttccaaatacaattgaaggtcttgtacac
gttagttatttaacggatgattactaccgttatgacgagcaacatttcgctatgatcgga
gaacgtacaggaaacgtattccgcatcggtgacgaaattacaattcgcgttattaacgta
aacaaagacgagcgtgcaatcgactttgaaatcgttggcatgaaaggcacacctcgccgt
aagttcaaagatcgtccagtcgttatcgagcagccaagaacaggcagaaagaaacgcggt
ggacgtagcgagcgcagtaatgagcgcggcggtgaacgtggcacaggtagaaaatttgac
cgtggtggtaaaggaaaaggaagaggatctgcatctgcatccgcttctgctagccagccg
ggaaaaaaagatggtaacggtaagaagaaaaaagcattcttcgaaaacgtaccaggattc
aagaagaaaaagaaaaagcgtaagtaa
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