Bacillus sp. A260: GD442_25215
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Entry
GD442_25215 CDS
T11424
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
baaz Bacillus sp. A260
Pathway
baaz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
baaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GD442_25215 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baaz03400
]
GD442_25215 (uvrB)
DNA repair and recombination proteins [BR:
baaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GD442_25215 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GD442_25215 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
AAA_19
AAA_30
AAA
AAA_22
UFL1
DUF1280
AAA_16
TrwB_AAD_bind
HH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
QGY38037
LinkDB
All DBs
Position
complement(4944678..4946654)
Genome browser
AA seq
658 aa
AA seq
DB search
MERQFEIVSAYSPQGDQPVAIEKLVEGINSGKKKQVLLGATGTGKTFTISNVIKEVQKPT
LVMAHNKTLAGQLYSELKDFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDAQINDEID
KLRHSATSALFERDDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEKDRNQLLRELVDVQ
YGRNDIDFKRGTFRVRGDVVEIFPASLDEHCIRIEFFGDEIDRIREVNALTGEVLAERDH
VAIFPASHFVTREEKMKVAIENIEKELEERLKELNDNGKLLEAQRIEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGATPYTLLDYFPKDFLIVMDESHVSVPQVRAMYNGDQARKQV
LVDHGFRLPSALDNRPLTFDEFEEKTNQVIYVSATPGPYELEQSPEVIEQIIRPTGLLDP
PIDIRPIEGQIDDLLGEIQDRIAKNERVLITTLTKKMSEDLTDYLKDVGIKVNYLHSEIK
TLERIEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNENGRVIMYADRITKSMGIAIEETKRRRSIQEAYNEEHGITPKTIQKGVRDVIRATT
AAEETETYEATPAKKMTKKEREKTIAKMEAEMKEAAKALDFERAAELRDLLLELKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtcaatttgaaattgtctcagcgtattccccgcaaggtgatcagccggtagct
atagagaagcttgtagagggaattaatagtggaaagaaaaagcaagtgttgcttggagca
acaggaacgggtaagacatttacgatttcaaatgtcattaaagaagtgcaaaagccaaca
cttgttatggctcataataaaacgttagcagggcagttatatagtgagttgaaagacttt
ttcccgaataatgcagttgaatattttgttagttactacgattattatcagccagaagcg
tatgtaccacaaacagatacgtttattgaaaaagatgcgcagattaatgatgaaattgat
aaattgcgtcactcggcaacgtctgcattatttgaacgggacgatgtaattattgttgcg
agtgtttcttgtatatatggcttaggttctccagaagaataccgcgagctagttgtttcg
cttcgagttggtatggaaaaagaccgtaatcaattgcttcgtgaacttgttgatgtacag
tatggacgtaatgatattgatttcaagcgtggtacattccgtgtgcgaggagatgtagtt
gaaatcttcccggcatcacttgatgagcattgtattcgaatcgaatttttcggtgatgaa
atcgatcgtattcgtgaagtaaatgcgttaacaggtgaagtattagcagaacgtgatcat
gtagcaatcttcccagcatctcacttcgttacacgtgaagaaaagatgaaggtcgctatt
gaaaatatcgaaaaagaattagaagagcgtttaaaggaattaaatgataacggcaagttg
ttagaagcgcagcgtatagaacagcgtacacgttatgatttagaaatgatgcgcgagatg
ggattttgttcaggtattgaaaactactcccgtcatttaacacttcgtccagcgggggca
acgccgtatacgctattagactatttcccgaaagatttcttaatcgttatggatgaatcg
cacgtatcagtaccacaagtaagagcgatgtataacggggaccaagcgcgtaagcaagtg
cttgtggatcatggattccgtctgccgtcagctttagataatagaccgctcacattcgat
gagtttgaagagaaaacgaatcaagttatttatgtttcagcaacgccaggaccgtatgag
ttagagcagtcgccagaagtaatagaacaaattattcgtccaacagggcttttagatcca
ccaattgatatacgaccaattgaagggcaaattgacgatttattaggagagattcaagat
cgtattgcaaaaaatgaacgtgtattaattacgactttaacgaagaaaatgtcagaggat
ttaacggattacttaaaagatgtaggaattaaagttaactatcttcactctgaaattaaa
acgttagaacgtattgaaattatccgcgatcttcgcctcggtaaatttgatgtacttgtc
ggcattaacttattgcgagaaggattagatattccggaagtatcacttgtagctatttta
gatgctgataaggaagggttcttgcgttcagaacgttcattaattcaaacaatcggtcgt
gccgcgcgtaatgaaaacggccgcgttattatgtatgcagatcgtataacgaaatctatg
ggaattgcgattgaagaaacgaagcgtcgtcgtagtatacaagaagcttacaatgaagag
catggtattacgccgaaaacgattcaaaaaggcgttcgtgatgttatccgtgcaacgaca
gctgctgaagagacagaaacatacgaagcaactcctgctaagaaaatgacgaaaaaagag
cgcgaaaagacaattgcgaagatggaagcagagatgaaagaagcagcaaaagcgttagac
ttcgagcgtgcagctgaactaagagatttactattagaattaaaagcggaagggtga
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