Buchnera aphidicola Bp (Baizongia pistaciae): bbp_538
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Entry
bbp_538 CDS
T00111
Symbol
rho
Name
(GenBank) rranscription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
bab
Buchnera aphidicola Bp (Baizongia pistaciae)
Pathway
bab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bbp_538 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bab03021
]
bbp_538 (rho)
03019 Messenger RNA biogenesis [BR:
bab03019
]
bbp_538 (rho)
Transcription machinery [BR:
bab03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
bbp_538 (rho)
Messenger RNA biogenesis [BR:
bab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
bbp_538 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA
DnaB_C
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AAO27237
UniProt:
Q89A22
LinkDB
All DBs
Position
complement(601520..602779)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTALKNIPVSELIFLGDNAGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNKVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMRRLVKGEVVASTFDEPSSRHV
QVSEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELPLSRKIAEKRVFPAIDY
NRSGTRKEELLTKSDELQKMWILRKIIHPMSEIDAMEFLINKLAMTKTNNEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttactgctttaaaaaatataccagtttctgagttaatttttcttggtgataat
gcaggattggaaaatttagctcgtatgagaaaacaagatattattttttctatattaaaa
caacatgctaaaagtggagaagatatatttggggacggtgttttggaaatactacaagat
ggatttggctttttgcgttcttctgatagttcatatctagctggtccagatgatatatat
gtgtctccaagtcagattagaagatttaatttacgaacaggtgatactatttctggaaaa
attcgtcctccaaaagaaggagaaagatattttgcgttattaaaagtaaataaagttaat
tatgataaacctgaaaatgctagaagtaaaattttgtttgaaaatctgacgcctttacat
gctaattctcgtttaaggatggaacgagggaatggatctactgaagatttaacagctcga
gtattagatttagcttctcctattggaagaggacaacgtggtttaattgtagccccacct
aaagccggtaaaactatgttgttacaaaatatagctcaaagtattgcttataatcatcct
gattgcgtattaatggtattgttgattgatgaaagaccagaagaagtaactgaaatgcgc
agattggttaaaggagaagtggtagcatctacatttgatgaaccttcttctcgtcatgta
caagtatcagaaatggttattgaaaaagctaagagattagttgagcataaaaaggatgta
attatattgttagattcgattactagattagcaagggcgtacaatactgttgtgccagcg
tctggaaaagttctaacaggaggcgtagatgccaatgctttgcatagacctaaacgtttt
tttggtgcagctcgtaatgtagaagaaggaggtagtttaacaattatagctactgcttta
attgatacaggttcaaaaatggacgaagtaatatatgaagaatttaaaggtactggaaat
atggaattacctttgtctagaaaaatagcagaaaagcgagtatttccagcaattgattat
aatcgttctggaacgcgaaaagaagagttattaactaaatctgatgaattgcaaaagatg
tggattttacgtaaaattattcatccaatgagcgaaattgatgcaatggaatttctaata
aacaaattagcaatgacaaaaacaaacaatgaattttttgatatgatgaaacgttcttaa
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