Brucella abortus NCTC 10505: DO78_52
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Entry
DO78_52 CDS
T03686
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
babc
Brucella abortus NCTC 10505
Pathway
babc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
babc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DO78_52
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
babc03019
]
DO78_52
03009 Ribosome biogenesis [BR:
babc03009
]
DO78_52
Enzymes [BR:
babc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DO78_52
Messenger RNA biogenesis [BR:
babc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DO78_52
Ribosome biogenesis [BR:
babc03009
]
Prokaryotic type
rRNA helicases
DO78_52
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIJ58774
LinkDB
All DBs
Position
1:58536..60416
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AA seq
626 aa
AA seq
DB search
MSLPDTIAPTLSGALTARGYNTLTAVQNAVLAPETLASDLLVSAQTGSGKTVAFGLAMAN
TILEDELRFGDAGAPLAMIIAPTRELALQVRRELEWLYADTGARIASCVGGMDIRTERRA
LERGSHIVVGTPGRLRDHITRNALDMSQLRAIVLDEADEMLDMGFREDLEFILGEAPEDR
RTLMFSATVPKPIAQLAKRFQNNALRITVQSETSQHADIDYVAMPVPPHERDHAIINTLL
YYDSQNSIIFCSTREAVKHMASRLSNRGFAVVALSGELSQAERNNALQAMRDGRARVCVA
TDVAARGIDLPNLDLVIHADLPTNPDTLLHRSGRTGRAGRKGTCVLVVPFSRRRSAERLL
HMAKLDAQTVPAPSIAAVQAKTNERILNAEVFNQPVEEEYQELLKALAERYTPEQIASAF
LNREVASYPAAEEVSDAPVHPVGGKKPRSDRFEKGDRYERGERRERGEPGERFDRNARFD
GVWFSVSAGRKHRADPKWLLPLICKAGDVSKRDVGSIKIFDNETRFEIAASKADEFRQSV
AERGTGEKSLVIRTAVAGAGGDAAARESRGSFKPRSDKFKEGGFRDGHKSDKPRDFSRGD
DFKKDGFKKGGKKPEGGGYSKKRRGE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcctgataccatcgctccgactctctccggagcattaaccgctcgcggttac
aatacgcttaccgctgttcagaatgctgttctggcccccgaaacactcgcttccgatctt
cttgtgtctgcccagacggggtctggcaagacggtggcttttggccttgccatggccaac
accattctcgaagacgaactgcgcttcggtgatgcgggtgcgccacttgccatgattatc
gcgccgacgcgcgaacttgcacttcaggtgcgccgtgaactggaatggctttatgccgat
accggcgcgcggattgcatcctgcgttggtggcatggatatccgtaccgagcgccgcgcg
ctggagcggggaagccatatcgtcgtcggcacgccgggccgcctgcgcgaccacattacg
cgcaatgcgctcgatatgtcgcaactgcgcgcgatcgtgctcgacgaagccgatgaaatg
ctcgacatgggctttcgcgaagacctcgaatttatcctgggcgaagcgccggaagaccgc
cgcacgctgatgttctcggcaaccgtgccgaagccgattgcccagcttgccaagcgtttc
cagaacaatgcattgcgcatcaccgttcagagcgaaaccagccagcatgccgatatcgat
tatgtcgccatgccggttccgccgcatgagcgtgaccatgcgatcatcaacacgctgctt
tattacgacagccagaactcgatcattttctgctccacccgcgaagcggtaaagcacatg
gcaagccgcctctccaatcgcggtttcgcggtggtggcgctttcaggtgagttgagccag
gcggagcgcaacaacgcgcttcaggccatgcgggacgggcgcgcccgcgtctgtgtggcg
accgacgttgccgcgcgcggcatcgacctgcccaatcttgatctggtcatccatgctgat
ctgccaaccaatccggatacgcttctgcatcgttctggccgtacgggccgcgcgggccgc
aagggcacctgcgtcctggttgtgccgttctcgcgccggcgcagtgccgaacgcctgttg
cacatggcaaagcttgatgcgcagacggttcccgcgcccagcattgctgccgttcaggcc
aagaccaatgagcgcattttgaatgcggaagtcttcaaccagcccgttgaagaagaatat
caggaactgctgaaggcccttgccgagcgttacacgccagagcagattgcgagcgccttc
ctcaatcgcgaagtggcctcctatccggcggcggaagaagtatccgatgcgccggtgcat
ccggtcggcggcaagaagccgcgttcggaccgttttgaaaagggtgatcgttatgagcgc
ggcgaacgccgtgagcgtggcgaaccgggcgaacgcttcgaccgcaatgcgcgttttgat
ggcgtctggttctcggtttcggctggccgcaagcaccgcgccgatccgaaatggctgctg
ccgctcatctgcaaggcgggtgacgtatccaagcgcgatgtcggctcgatcaagattttc
gacaatgaaacgcgctttgaaattgcggcatccaaggcggatgaattccgccagtcggtg
gctgaacgcggcacgggcgaaaagagtctcgtaatccgcaccgccgttgccggtgctggc
ggcgatgctgctgcgcgtgagagccgcggcagcttcaagccacgtagcgacaagttcaag
gaaggcggcttccgggacggccacaagagcgataagccgcgcgatttttcccgcggtgat
gacttcaagaaagatggcttcaaaaagggcggtaaaaaacccgaaggtggcggttacagc
aagaagcgtcgcggtgaataa
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