Brucella abortus NCTC 10505: DO78_745
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Entry
DO78_745 CDS
T03686
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
babc
Brucella abortus NCTC 10505
Pathway
babc03030
DNA replication
babc03430
Mismatch repair
babc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
babc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DO78_745 (dnaE)
03430 Mismatch repair
DO78_745 (dnaE)
03440 Homologous recombination
DO78_745 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
babc03032
]
DO78_745 (dnaE)
03400 DNA repair and recombination proteins [BR:
babc03400
]
DO78_745 (dnaE)
Enzymes [BR:
babc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DO78_745 (dnaE)
DNA replication proteins [BR:
babc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DO78_745 (dnaE)
DNA repair and recombination proteins [BR:
babc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DO78_745 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AIJ57200
LinkDB
All DBs
Position
1:742982..746473
Genome browser
AA seq
1163 aa
AA seq
DB search
MNDTVAGNAASGSSATPGFVHLRVHSAYSLLEGALPLGKIIKQALADEAPAIAVTDTNNL
FGALEFAQKASKDGVQPIIGCQLDVAFGDHNDNSRSVNRKLALDLAPLVLIAATEAGYAN
IVRLVSRAFLDTPAGDPIHIEAGWLPALSEDVIALTGGPLGPIGRSFTADRADRARARLA
FLKETFGNRLYVELQRQAGYDRTVEASTVELAYEMDLPLVATNEAFFPKAEDFEAHDALL
AIAEGQILSNDDRRRLTPDHCLKSRAEMAELFADLPEALENTVEIAGRCSWYTQTRKPIL
PRFTGESDDPEAAVQAEADELARQAREGLKKRLETAGLAEGYTPEQYAERLEYEIGIITR
MKFPGYFLIVADFIKWAKAHGIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNP
DRVSMPDFDIDFCQDRREEVIRYVQEKYGRDQVAQIITFGTLQARAVLRDVGRVLEMPYG
QVDRLCKLVPQNPANPVSLAQAIESEPKINEEREKEPVVGRLLDMALKLEGLYRHASTHA
AGIVIGDRPLSELVPMYRDPRFDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLQTAVKLV
ARKGIDIDLSHLPLDDALTYEMLSRGETVGVFQVESAGMRKALLGMKPDRVEDIIALVAL
YRPGPMENIPTYNARKNGEEEIASIHPKIDHLIKETQGVIVYQEQVMQIAQVLSGYSLGE
ADLLRRAMGKKIREEMDKQRVRFVDGAVERGVDKAQANMIFDLLAKFADYGFNKSHAAAY
AIVSYQTAYMKAHYPVEFLAASMTYDMSNTDKLNDFRREANRLGIEVVPPSVKTSFRPFE
VGEKKIFYSLAAIKGVGEAAVDHIVDVRAEKQFESLEDFCERIDPKIINRRVLESLINAG
AMDCFGRDRAAMCAGMDRILGFAQRTQENAVSGQSDIFGLSGAPRETLILPPTAPWLPSE
MLHREFQAVGFYLSAHPLDEYRDVLNRMRVQSWADFSAAVKRGASAGRLAGTVTARQERK
TRTGNKMGIVQLSDASGQFEAVLFSEGLAQYRDLLESGKSVVITVQAENRPEGIGLRIQT
VQSLEDEACRMQKAMRLYLRSADAVRHIAPHFNTRGDGQVSLIVIKDNGQREVEIELPHR
YRVSPQIASAMKAIQGVVEVELV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacggtagcaggaaacgcagcgagcggtagctctgctacgccgggtttcgtt
catctgcgggttcattccgcctattccttgctggaaggcgcattgccgcttggcaagatc
atcaaacaggcgcttgccgacgaagcgccggccatcgcagtcacggacaccaacaatctg
ttcggtgcgctggaatttgcgcagaaggcgtcgaaggatggtgtgcagccgattatcggc
tgtcagcttgatgttgccttcggcgatcataatgacaatagccgcagtgttaaccgcaag
ctcgcgctggatcttgcgccgcttgtcctgattgcggcaacggaagcaggctatgccaat
attgtgcggcttgtaagccgtgcatttctggatacgcctgctggcgaccctatccacata
gaggctggctggctgccagccttgtctgaggatgtaatcgcgctaaccggcggacctttg
gggccgatcgggcggtccttcacggcggatcgtgccgaccgcgcgcgcgcgcgcttggct
ttcctgaaggaaaccttcggcaatcgtctctatgtcgaattgcagcgccaggcggggtat
gaccgcactgtggaagccagtacggtggaactggcttacgagatggatttgccgctggtc
gcgaccaacgaggcttttttcccgaaagcggaggatttcgaggcgcatgatgcgctgctc
gccattgcggaaggccagattctctccaacgatgatcgccgccgcctgacaccggatcat
tgtctgaaaagccgcgcggaaatggcggagctttttgccgacctgccggaagcacttgag
aatacggtcgaaattgccgggcgttgtagttggtacacgcagacgcgtaagccgatcctg
ccacggtttaccggcgagtccgacgatccggaagctgccgttcaggcggaagctgacgaa
cttgcgcggcaggcgcgcgagggcctgaagaagcgtcttgagactgcgggccttgcggaa
ggctatacgccggaacaatatgccgaacgcctcgaatatgagatcggcatcatcacccgc
atgaagtttccgggctatttcctgatcgttgccgactttatcaaatgggccaaagctcat
ggtattccggtcgggccgggccgtggttccggtgccggttctcttgtcgcctatgcgctg
accatcaccgatgtcgatccgctgcgcttctcgctactttttgaacgctttctcaatccc
gatcgcgtttcgatgcccgacttcgatatcgatttctgtcaggatcgccgcgaagaggtg
atccgctatgtgcaggaaaaatacgggcgcgatcaggttgcacagatcatcacgtttgga
accttgcaggctcgcgccgtgctgcgtgacgttggccgtgttctggaaatgccatatggg
caggtggatcgcctctgcaagctggtgccgcagaacccggccaatccggtatcattggcg
caagccatcgagtccgagcctaagatcaacgaggagcgcgagaaggagccggtcgtcggc
cgccttctcgacatggcgctgaagcttgaagggctttaccggcatgcatcgacccatgcc
gctggcatcgtgatcggtgatcgacctttgtctgagctggtgccaatgtatcgcgatccg
cgattcgacatgcctgtcacccagttcaatatgaagtgggtggagcaggcgggtctcgtc
aagttcgacttcctcggcctcaagacgctgaccgttcttcaaacggcggtcaagctggtg
gcgcgcaaggggatcgatatcgatctttcccacctgccgcttgatgatgcgctgacctat
gaaatgctgtcgcgcggtgaaaccgttggtgtgttccaggttgaaagtgcgggtatgcgc
aaggcgctgctcggcatgaagccggatcgtgtcgaggatattattgcgcttgtggcgctt
tatcgtccgggcccgatggagaacattccaacctataatgcgcgcaagaatggtgaggag
gagatcgcctccattcacccgaagatcgatcacctgatcaaggaaacgcagggcgtcatc
gtctatcaggaacaggtgatgcagatcgcgcaggtgctttcgggctattcgctcggcgaa
gctgaccttctgcgccgcgccatgggcaagaagatacgcgaggaaatggacaagcagcgt
gtccgtttcgtggatggtgcggttgagcgtggggtggacaaggcgcaggcgaacatgatt
ttcgatctgcttgccaagttcgccgactatggcttcaacaagtcgcacgctgcggcctat
gccatcgtttcttaccagacggcttatatgaaggcgcattacccggtcgagttcctcgcc
gcgtcgatgacctacgatatgtcgaacaccgataagctcaacgatttccgccgcgaggcg
aaccgtctaggcattgaggttgtgccgccttcggtgaagacatcgttccgcccgtttgaa
gtgggtgagaagaagattttctattcgctcgcagccatcaagggtgtgggggaggcggct
gtcgatcatattgtcgatgtgcgtgccgaaaaacagtttgaaagccttgaggatttttgc
gagcggattgatcccaaaattatcaatcgccgtgttctggaaagcctcatcaatgcaggc
gcgatggattgttttgggcgggaccgcgctgccatgtgcgccgggatggaccgcattctg
ggctttgcccagcgcacgcaggaaaatgccgtcagcggccagtcggatattttcggcctt
tccggcgcgcccagggaaacacttatcctgccgccgacagccccctggctgccatctgaa
atgctgcatcgtgagtttcaggcggtcggcttttatctgtctgcccatccgctggacgaa
tatcgcgacgtcttgaaccggatgcgtgtgcaaagctgggctgatttttcagccgcggta
aagcgcggcgcaagcgcggggcgtctggccgggacggttacggcccggcaggagcgcaag
acccgcaccggcaacaagatgggtatcgtgcagctttccgacgccagcggccagtttgag
gcggtcctgttttcggaagggctcgcacaatatcgcgatctgttggaaagcggcaaatcg
gtggtgatcacggtgcaggcggaaaaccggcctgaaggcatcggattgcgcattcagact
gtccagtcgctggaagacgaggcttgccgtatgcagaaggctatgcgactctatctgcgc
tcggctgatgcggtccgccacatcgcaccgcatttcaatacacgcggtgacggacaggtg
agcctcatcgtcatcaaggataacggacagcgtgaggtggagatcgaattgccgcatcgc
tatcgcgtcagcccgcagatcgcgagcgccatgaaggctatccagggcgttgtggaagtc
gagcttgtttag
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