Bacillus sp. BD59S: EKQ63_23510
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Entry
EKQ63_23510 CDS
T11450
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
babd Bacillus sp. BD59S
Pathway
babd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
babd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EKQ63_23510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
babd03400
]
EKQ63_23510
Enzymes [BR:
babd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EKQ63_23510
DNA repair and recombination proteins [BR:
babd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EKQ63_23510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
DEAD
AAA
AAA_16
T2SSE
nSTAND3
AAA_12
AAA_28
AAA_29
TsaE
DUF4926
NPHP3_N
UvrD_C
HHH_5
Rad17
AAA_7
Zeta_toxin
AAA_18
NTPase_1
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QDQ07921
LinkDB
All DBs
Position
complement(4096922..4099258)
Genome browser
AA seq
778 aa
AA seq
DB search
MGNQHAMDLFEEEKKFIKAQVLHTIFHNEENLYSVVSMKVIETNETYDEKKVMINGHFPR
MHEDEVFTLTGHFKDHPKYGKQYMVETFKKELPQTKAGMVQYLASDLFKGIGKRTAEKIV
DHLGEHAISKIMDDPEALNGVVNKQKAQEIYETIVEHQGLEKVMSFLNGYGFGTKLSIKI
YQQYKEMTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHDDRVRAGCFYTLENVS
LQLGHVYMRKDQLVRETMSLLNNQEGKVAEEDVVGCIEMMQSEGKVIIEEERVYLATLFY
SEKGVVKSIRRLMNQEETPSFPEAEVLKTLGEIEEQLNVQYAPFQQEAIQTALHKPMMLL
TGGPGTGKTTVIKGIVEMYASLHGLSLNPNEYSDDNPFPILLTAPTGRAAKRMSESTGLP
ACTIHRLLGWTPEGSFQRNETDPVQGKLLIIDEFSMVDIWLANQLFKSLPTNIQVIVVGD
EDQLPSVGPGQVLKDLLNAGAVPTVKLTEIYRQAEGSSVIQLAHAIKNGTLPPDLAQNQK
DRSFIGCTGAQIVEVVKKVCENAKTKGFSARDVQVLAPMYRGPAGINVLNEALQEVFNPK
REKSKEIAYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIVSVFYAKENVEQQDMIIVSFD
GIEVTYTKPDLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKF
LIICGEEAAFQSGVNRLDDAMRQTTLANRLQESQGEVQMVTVNGEEMDVENISPYDFM
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcaacatgcaatggatttgtttgaggaagagaaaaagtttataaaagcgcaa
gttcttcataccattttccacaacgaagaaaacctctattccgttgtcagtatgaaagtc
attgaaacgaatgaaacgtacgacgaaaagaaagtaatgataaacggtcattttccccgc
atgcacgaagatgaagtgtttacattgacaggtcattttaaagaccatccgaagtatgga
aaacaatatatggttgaaacatttaagaaagaattgccacaaacaaaagccggtatggtg
caatatttagcgagtgatttatttaaaggaataggaaagcgtacagctgaaaaaattgta
gatcatctcggagaacatgctatttctaaaattatggatgaccctgaggcattaaatggt
gttgttaataaacaaaaggctcaggaaatatatgagacaattgttgaacatcaaggatta
gagaaagtaatgagctttttaaatggctacggttttggaacgaaactttctattaagatt
taccagcaatataaagagatgacattagaagtgattcgtaataacccgtaccaacttatc
gaagaagtggacgggattggttttggaagagcggatgatatagggcgtgcgttagggata
tcgggtaatcacgacgaccgtgtacgcgcaggatgtttttacacgttagagaatgtttca
ctgcaacttggtcacgtttatatgaggaaagatcaacttgtaagagaaacgatgtcactt
ttaaacaatcaagaaggaaaagtggctgaggaagacgttgtaggctgtattgaaatgatg
caaagtgaagggaaagtcatcatagaagaagagcgagtgtatttagcgacgctgttctac
tctgaaaaaggtgttgtaaagtctattcgcaggcttatgaatcaagaagaaacaccttca
tttccagaagcagaagtgttaaaaacattaggtgaaattgaagaacaactgaacgtacaa
tatgcaccgtttcagcaagaagcgattcaaacggcacttcataaaccgatgatgttatta
acaggtggaccaggaacagggaaaacaacagttattaaaggaattgttgagatgtatgct
tcacttcacgggttatcgttaaatccgaatgaatacagtgatgataatccatttccgata
ttattaacggccccaacaggaagagcagcgaagcgaatgagtgaatcaacaggtcttcca
gcttgtacaattcaccgtttacttggctggacgccagaagggtctttccagcgtaatgaa
acggatccggtacaagggaaattgctcattattgatgaattctcaatggttgatatttgg
cttgcaaatcagctatttaagtcattgcccacgaacattcaagttatcgttgtaggagat
gaagatcaattgccatctgtaggacctggacaagtgctgaaagatttattgaatgcaggt
gcagttccaacagtaaagcttactgaaatttatcgtcaggcggaaggctcatcagttatt
caacttgcccatgcgataaaaaatggaacactcccgccagatttagcgcaaaatcaaaaa
gatcgttcatttatcggctgtacaggagctcaaattgttgaggttgttaaaaaggtttgt
gaaaatgctaagacaaaaggatttagcgcaagagatgtacaagtattggccccgatgtat
cgtggaccggccggtattaatgtattaaacgaagcgttgcaagaagtgtttaacccgaaa
agggaaaagagtaaagaaattgcttacggtgatgttgtataccgaagaggagataaagta
ctgcaactcgtgaatcagcctgagagccaagtgtttaatggtgatatcggagaaattgtt
tcggtgttttatgcgaaagaaaacgttgagcaacaagatatgatcatcgtttcatttgat
ggaattgaggtaacatatacaaagccggatttaaatcaaattacacatgcctattgctgt
tcgattcataaatcacaaggcagtgagtttccgattgtgattatgccgatagtaaaaagt
tataatcgtatgttacgtcgtaatttaatttatactggtattacaagaagtaagaagttc
cttattatttgcggggaggaagccgctttccagtctggtgtaaatcgccttgatgatgca
atgcgtcaaacgactttagctaatcgcttgcaggaatcacaaggagaagtacagatggta
acagttaatggcgaagaaatggacgtggaaaacatttcaccgtatgatttcatgtaa
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