Bacillus sp. BD59S: EKQ63_24490
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Entry
EKQ63_24490 CDS
T11450
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
babd Bacillus sp. BD59S
Pathway
babd03030
DNA replication
babd03430
Mismatch repair
babd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
babd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKQ63_24490 (dnaE)
03430 Mismatch repair
EKQ63_24490 (dnaE)
03440 Homologous recombination
EKQ63_24490 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
babd03032
]
EKQ63_24490 (dnaE)
03400 DNA repair and recombination proteins [BR:
babd03400
]
EKQ63_24490 (dnaE)
Enzymes [BR:
babd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKQ63_24490 (dnaE)
DNA replication proteins [BR:
babd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EKQ63_24490 (dnaE)
DNA repair and recombination proteins [BR:
babd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EKQ63_24490 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QDQ08108
LinkDB
All DBs
Position
complement(4297204..4300530)
Genome browser
AA seq
1108 aa
AA seq
DB search
MKFVHLQCQTVFSLLKSACKIDELVVRAKELGYSSLAITDENVMYGVIPFYKACKKHGIH
PIIGLTASIFSEEEEKSYPLVLLAENEIGYQNLLKISSSIMTKSKEGIPKKWLAHYAKGL
IAISPGKDGEIEQLLLEDKESQAEEVARMYQNMFGNFYMSLQHHAIQDELLLQEKLPAFM
SRINVPVVATNDVRYINQSDALVHECLLSVESGTKMTDPDRPKLKTDQYYLKSSDEMEAL
FSHVEEAIYNTVEIAERCRVEIPFHVNQLPKFPVPSNETNDMYLRRVCEEGLQKRYGTPK
EVHIKRLNHELNVISSMGFSDYFLIVWDFMKYAHENHILTGPGRGSAAGSLVSYVLEITD
IDPIEYDLLFERFLNPERVTLPDIDIDFPDIRRDEMIRYVKDKYGQLRVAQIVTFGTLAA
KAAIRDIARVMGLPPRDIDIFSKLIPSKLGITLKDAYEESQSLREFIQGNLLHERVFEIA
KRVEGLPRHTSIHAAGVIMSQEPLTGSVAIQEGHNDVYVTQYPADALEELGLLKMDFLGL
RNLTLLENIIKFIVQKTGKEIDIRNLPLQDEKTFQLLGRGDTTGVFQLESGGMRNVLRGL
KPNEFEDIVAVNSLYRPGPMEQIPTFIESKHGKRKIEYLHPDLKPILERTYGVIVYQEQI
MQIASKLAGFSLGEADLLRRAVSKKNRDILDQERRHFVQGCLQNGYDETSAEKIYDLIVR
FANYGFNRSHAVAYSMIGYQLAYLKANYTLEFMTALLSSAIGNEDKIVQYIRETKRKGFH
VLPPSLQRSGYNFQIEGNAIRYSLLSIRNIGMATVTALIEEREKKMFEDLFEFCLRMPSK
FVTERNLEAFVWSGCFDDFGVSRTNLWKSLKGALEYANLARDLGDAVPKSKYVQGEELSF
IEQLNKEKEVLGFYLSSYPTAQYVKLAKELEIPSLAQAMRHKKKVQRAIVYITSVRVIRT
KKLQKMAFITFCDQNDEMEAVLFPETYIHFSDKLQEGAIVLVDGTIELRNHKLQWIVNGL
YPLEEMDVYEGKKDASVYVKLPSQYEKKLLNQVTKILFDYSGFAKVLIYYEKEHKMVQLS
RSLSIHPSEECLGALREIVGEENVVVKI
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttgtgcatttacaatgtcaaaccgtttttagtttattaaaaagtgcttgtaaa
attgatgagcttgtagttagggcgaaagagctcggttattcatcgctagctattacggat
gaaaatgttatgtatggcgttattccgttttataaagcatgtaagaaacatggtatacat
cctattatcggtttaacagcttctatttttagtgaagaagaagaaaagtcttatccgctt
gtcttacttgctgaaaatgaaataggttatcaaaatttattgaaaatttctagtagcatt
atgacgaagtcaaaagaaggtattcctaagaaatggcttgcacattatgcgaaaggatta
attgctatttcaccaggtaaagatggggaaattgaacaattattattagaagacaaagag
agtcaagctgaagaagtagctcgtatgtatcaaaatatgttcggcaatttttatatgagt
ttacagcatcatgcgattcaagatgaactgcttctgcaagagaaattacctgcatttatg
agtaggataaatgtcccggtcgttgcaacaaacgatgtacgctacatcaatcaaagtgac
gcactcgttcatgaatgcttattatctgttgaaagtggaacgaaaatgacggatccagat
aggccgaagctgaaaacagatcaatattatttaaaatcatcagatgaaatggaagcacta
ttttctcacgtagaagaagcgatttataacacagtagaaattgcagaacgttgcagagta
gaaataccgtttcatgtaaatcaattaccgaaattccctgttccatctaacgaaacgaat
gatatgtatttacgccgcgtttgtgaagaaggattgcagaaacgttatggtacgccgaaa
gaagtacatataaagcgtttgaatcatgaattaaacgtgatttctagcatggggtttagt
gattatttcctcattgtctgggattttatgaagtacgcgcatgaaaatcatattttaaca
ggaccaggtcgtggatcagcggctggctcactcgtttcttacgtattagaaattacagat
attgatccaattgaatacgatctattatttgaaaggtttttaaaccccgaacgtgtcaca
cttccagatattgatatcgattttcccgatataagacgtgatgagatgattcgatatgtg
aaagataaatatggtcagcttcgtgttgctcaaattgtaacgttcgggacgctggcagcg
aaagcggcaattagagatattgcgcgtgtaatggggcttccgccgcgagatatcgacata
ttctcaaaacttatcccatcaaagcttggtataacgttaaaagatgcatatgaggaatct
cagtcactccgtgagtttatacaaggaaaccttttgcatgagcgtgtgtttgaaattgca
aaacgtgtagaaggcttaccgcgtcatacgtctattcatgcagctggcgttattatgagc
caagagccattaaccggaagtgttgcaattcaagaagggcataacgatgtgtatgttacg
caatacccagctgatgcattagaagaacttgggttgctcaagatggactttttaggatta
cgtaatttaacgttacttgaaaatattataaagtttattgtgcaaaaaacagggaaagaa
atcgatataagaaatttaccacttcaagatgaaaagacattccaattgttaggtagaggg
gatacaacaggtgtattccagcttgaatcaggtggtatgcgaaatgtacttcgcgggtta
aagccgaatgaatttgaagatattgtcgctgttaactcgttatatagaccaggaccgatg
gaacaaattccaacctttattgaatcaaagcatggaaaaagaaaaattgaatatttacat
ccggacttaaaaccgattttagaaagaacatatggtgtaattgtataccaagaacaaatt
atgcaaattgcgtcgaagttggcgggcttttcgctcggagaagcagatttattacgccgt
gcagtgagtaaaaaaaatcgtgatattttagatcaggaacgtaggcattttgtgcaaggg
tgtttacaaaatggttatgatgagacatctgcagagaaaatttacgatttaattgtaaga
ttcgcaaattacggttttaaccgaagtcacgctgtagcctacagtatgattggatatcaa
cttgcctatttaaaagcgaattatacgttggaatttatgacggcactattatcgagtgca
attggaaatgaagataagattgtgcagtatatacgagaaacgaagcgaaaaggttttcat
gttttgccgccgtctcttcagagaagtggttataatttccaaatagaaggaaatgcgata
cgttacagcttactttccattcgaaacatcggaatggctacagtgacagcattaatcgaa
gaacgagagaaaaaaatgtttgaagatttatttgaattttgtctgcgcatgccatcaaag
tttgtaacagagcgaaatttagaggcgttcgtctggtctggatgttttgacgattttggt
gtttcgagaacgaatttatggaaaagtcttaaaggagctttagagtatgccaatcttgca
cgtgatttaggagatgctgttccaaaatcaaaatacgtacaaggagaagagctctctttt
attgaacagttaaataaagagaaggaagtactaggtttttatttatcaagctatccgaca
gcgcagtatgtgaagttagcgaaagaattagaaattccatctcttgctcaggcgatgcga
cataagaaaaaagtacaaagagctatcgtgtacataacaagcgtgagagtgattcgtacg
aaaaagttgcaaaagatggcatttattacattttgtgatcaaaatgatgaaatggaagca
gttcttttccccgaaacgtatatacatttctcagataagttacaagaaggagcaattgtg
ttagttgacggcacgattgagcttagaaatcataagctgcaatggattgtaaatggacta
tatccgttagaagaaatggatgtgtatgagggaaaaaaagatgcgtctgtttacgtgaaa
ttgccgtctcaatatgagaaaaagcttttaaatcaggttactaaaatattgtttgactat
tcgggttttgcgaaagtactaatttattatgaaaaggaacataaaatggtacaattatct
cgaagtttatcgattcatccaagtgaagaatgtttaggagcacttcgtgaaattgtcggg
gaagaaaatgtggttgtgaaaatataa
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