Brucella abortus bv. 6 870: DO74_3021
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Entry
DO74_3021 CDS
T03392
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
babr
Brucella abortus bv. 6 870
Pathway
babr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
babr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DO74_3021 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
babr03019
]
DO74_3021 (rnr)
03016 Transfer RNA biogenesis [BR:
babr03016
]
DO74_3021 (rnr)
Enzymes [BR:
babr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DO74_3021 (rnr)
Messenger RNA biogenesis [BR:
babr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DO74_3021 (rnr)
Transfer RNA biogenesis [BR:
babr03016
]
Prokaryotic type
tRNA degradation factors
DO74_3021 (rnr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AIJ65907
LinkDB
All DBs
Position
2:complement(974152..976503)
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AA seq
783 aa
AA seq
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MARRFSKSDTGRSARTERRAATAQSKDSAAFLPTREEVLKYIEENPDRAGKRELAKAFNI
KGDARVYLKDLLRELADEGLVEKRARKLSRPGSLPSVAVLDITGRDEDGGLLARPAEWDE
ASHGKPPVVLLRRTRLNKTSESGPVVGVGDRVLAKIFRNEDHAGPDFSARVMKRLEHHAN
AVLGVVRKLGNGKWRLEPVNRKQGEVQLDPAMLENAESGDLVEVELLSARRYGLPRGKVR
QVVGSIDSEKALSMIAIHEHEIPHVFPDEVLREAETAGPATLEGREDWREIPLITIDPAD
AKDHDDAVYAESDTDPENPGGQVVIVAIADVAAYVRPGSALDREAQKRGNSVYFPDRVVP
MLPERISNDLCSLREMEDRPALAVRMIFSADGRKKSHKFHRIMMRSAAKVAYGQAQAAID
GAPDDKTGPILDTVLKPLWNAYAVLKRGRDAREPLELDLPEKKILLTPEGKVDKVIVPER
LDAHKLIEEFMIQANVSAAETLEGRHQPLIFRIHGEPALAKQETLREFLRTLDLNLAKGA
QLQPAQFNRILAAVDGTDHQELVNQVVLRTQSQAEYSPDNIGHFGLHLRRYAHFTSPIRR
YADLIVHRALIKALGLGTDGLTSAEEAQLEEISALISATERRAMLAERETVDRLIAHFLA
SHLGDEYEGRVTGVTRAGLFVNLATYGADGLVPISILGDEYYLYDEANHAIAGERSGRGF
RLGDTVTVRLVEALPVAGALRFEMVSEPHPLPMSTRSHHKASRAMRGRKGKPAGIPRHKR
RGH
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgccgtttttccaaatccgataccggacgatccgcacggaccgagcggcgtgca
gccacagcccaatcgaaagattccgcagcctttttgccgacacgggaagaggtcctcaaa
tatatcgaggaaaatcccgatcgcgcgggcaagcgggaactcgccaaggctttcaacatc
aagggcgatgcacgggtctatctgaaagacctgttgcgtgagcttgccgatgaaggtctc
gtcgaaaagcgcgcgcgcaagctttcgcgtcccggctcgctgccatcggttgcggttctc
gatattacgggccgggatgaggatggaggcctgcttgcccgcccggctgaatgggatgag
gcgagccacggcaagccgccagtggtcctgctgcggcgaacccggcttaacaagacgtca
gaaagtggccctgtcgtcggcgttggcgaccgcgttctggcgaaaatcttccgcaatgaa
gatcacgcagggccggatttttccgcccgcgtgatgaagcggctggaacatcacgccaat
gccgttctgggcgtggtgcgcaaacttggcaatggcaaatggcggctggagccggtcaat
cgcaaacagggcgaagtgcagcttgatcccgccatgctggaaaatgccgaaagcggcgat
ctggtggaagtagaactgctttccgcgcgccgttacggcctgccgcgcggcaaggtccgt
caggtggttggctccatcgatagtgaaaaggcgctgtcgatgatcgccattcacgaacat
gaaatcccgcatgtttttcctgacgaagtgctgcgcgaggctgaaaccgcaggccctgcc
acgctggaaggccgcgaagactggcgcgaaatcccgctcatcaccatcgatccggccgac
gccaaggaccatgacgatgcggtctatgccgaatcggatacggacccggaaaatcccggc
gggcaagtcgtcatcgtcgccatcgccgatgtcgccgcctatgtgcggcccggctcagcc
cttgatcgcgaagcgcagaaacgcggcaattccgtctattttcccgaccgcgttgtaccg
atgctgcccgaacgcatctccaatgatctttgctccctgcgcgagatggaagaccggccg
gcgctggcggtccgtatgattttcagtgccgacgggcgcaagaaatcacacaagttccac
cgcatcatgatgcgctcggccgccaaggttgcctatggccaggcgcaagccgccatagac
ggcgcccccgatgacaagaccgggccgattcttgataccgttctaaagccgctctggaac
gcctatgcggttctcaagcgcgggcgtgacgcacgcgagccgctggaactcgatctgccg
gaaaagaaaatcctactgacgccggaaggcaaggtggacaaagtcatcgtgccggaacgc
ctcgatgcgcataagctcatcgaagaattcatgattcaggccaatgtgtctgccgccgaa
acgctcgaaggacggcaccagccgcttattttccgcattcacggtgaaccggcgctggcc
aagcaggaaaccctgcgtgagttcctgcgtacgctggatctcaatcttgccaagggcgcg
caactgcagcccgcgcagttcaatcgcattctggcggcggtcgatggcacagaccatcag
gaactcgtcaatcaggtcgtgctgcgcacccagagccaggccgaatacagccccgacaat
atcggccattttggcctgcatctgcgccgttatgcgcatttcacctcaccaatccgccgt
tatgctgatctgatcgtgcaccgcgcgctcatcaaggcgctggggcttggcacggacggg
ttgacgagcgcggaagaagcgcagcttgaagagatttcggccctgatttcggccaccgaa
cgccgcgccatgctggctgagcgtgaaaccgtggatcggctgatcgcgcatttcctcgcc
tcgcatctcggcgacgaatatgaggggcgcgttaccggcgtcacgcgcgccggtctgttc
gtcaatcttgcgacatatggcgcagacggactggtgcccatttcaattttgggcgatgaa
tattatctatatgacgaagcaaaccacgcaatcgcgggcgaacgaagcggcaggggcttt
cgtctgggcgatacggtaacggtgaggcttgtggaagcactccccgttgcgggtgcgctt
cgttttgaaatggtttccgaaccgcaccccttgcccatgtcgacgcgctcgcatcataag
gcgagccgggcaatgcggggccggaaaggcaagccggcgggtattccccgccacaagagg
agaggtcactga
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