Brucella abortus BER: DK51_1319
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Entry
DK51_1319 CDS
T03685
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
babs
Brucella abortus BER
Brite
KEGG Orthology (KO) [BR:
babs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
babs03019
]
DK51_1319 (hrpB)
Enzymes [BR:
babs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DK51_1319 (hrpB)
Messenger RNA biogenesis [BR:
babs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DK51_1319 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
AAA_30
ResIII
AAA_19
AAA_22
Cas3-like_C_2
TIM-barrel_EndoS
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIJ53907
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All DBs
Position
1:complement(1322948..1324804)
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AA seq
618 aa
AA seq
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MTSLPDLPVTRILPQLDEALAHHASAVLVAPPGAGKTTLVPLHMLGADWRGEGVIVLLEP
RRLAARAAARRMAQLLGEEPGETVGYRMRLESKVSAKTRILVVTEGVFARMILDDPDLNG
VAAVLFDEFHERSLDADFGLALALDVQAALRDDLKILVMSATLDGARVASLLGDAPVIES
EGRAYPVDIRYRDRKADERIEDAMARAIRDALVDETGSILAFLPGQGEIERTARLLEERL
PANVLLAPLYGAMEGSAQDAAIRPAPAGSRKIVLATSIAETSITIDGVRVVIDSGLARLP
KYEPATGLTRLETVRTSRASADQRAGRAGRTEPGIAIRLWHQGQTASLPAFSPPEILEAD
LSGLVLDAAAWGVTDPATLNFLDKPPKPALAEAKALLHRLGALDEAGRLTPDGEAMRSLA
LPARLAHMVTEAAKRGEAQAAAELAVLLTERGLGGKDIDLETRLSRFRGDRSDRAQRARG
LAKRLAANLRNQGAPAGSTVGRLLIDAYPDRIAKARGTTGQFLLANGRGGEVDPAVSLSR
APWLVVADMSGKAGRARILSAAETSEAEIRAALGGRIESGKQIVYDPEKNALRARGCAHR
RNSPFGKASCRALGRWRR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
ttgacgagcctgcccgatcttcccgtgacacgaattctgcctcagcttgatgaggcattg
gcgcatcatgcaagcgcggtccttgttgcgccgccgggtgcgggcaaaacgacgctggtg
ccgctccatatgctgggtgcggactggcgcggggaaggcgtgatcgtgcttctggagcca
aggcggcttgctgcccgcgctgccgcccgccgcatggcgcagcttctgggtgaagagccg
ggtgaaacggtcggctaccggatgcgccttgaaagcaaggtatcggccaaaaccagaatt
cttgtcgtcaccgagggcgtctttgcgcgcatgatcctggatgatccggacctgaatggc
gttgccgccgttctctttgatgaatttcatgaacgcagccttgatgccgatttcggtctg
gcgctggcgctcgatgtgcaggcggcactgcgcgacgatctcaaaatcctcgtcatgtcg
gcaacgctggatggtgcgcgcgtggcctcgcttctcggcgatgcgccggtcatcgagagc
gagggccgcgcttatcccgtcgatatccgctatcgcgaccgcaaggcggatgagcggatt
gaggatgccatggcgcgggcaatccgcgatgcactggtggatgaaacgggcagtattctg
gccttcctgccggggcagggcgagatagaacgcacggcacggcttctggaagaaaggctg
ccggccaatgtcctgcttgcgccgctttatggagcgatggaaggcagcgcacaggatgcg
gcaatcaggcccgcgcctgcgggtagccgcaagatcgtgctggcgacctcgattgccgaa
acgtccatcacgatcgatggcgtgcgggtggtgattgacagcgggcttgcccgcctgccc
aaatatgaaccggccaccggcctcacccggcttgaaaccgtgcgaacatcgcgcgcaagc
gcggatcagcgcgcgggccgtgccgggcgaaccgaacccggcattgccattcgcctgtgg
catcaggggcagacggcttcgcttcccgctttctcgccgccggagattctggaggctgac
ctgtccggcctcgtgctcgatgccgccgcatggggtgtgaccgatccggcaacgctcaat
tttcttgataagccaccgaaaccggccctcgccgaagcgaaggcgcttttgcatcggctg
ggcgcgctcgacgaggctggccgcctgacgccggatggtgaggcgatgcgctcgctcgct
ctgcccgcgcggcttgcccatatggtgaccgaagctgccaagcgcggcgaggcacaggcc
gccgccgaactggcggtgcttttgaccgagcgcgggcttggcggcaaggatatcgacctt
gagacccgtctttcgcgctttcgcggtgatcggtcggatcgcgcgcagcgcgccagggga
ttggcaaagcgcctcgctgcaaatctgcgcaatcagggtgcgccagccggttcgaccgtg
ggacgcttgttgatcgacgcctatccggaccgcattgcaaaggcgcgcgggactaccggg
cagttcctgctggccaacgggcgcggcggcgaagtcgatcctgccgtcagccttagccgt
gcgccatggctggtcgtggccgatatgtccggcaaggcgggccgcgcccgcatcctgtcg
gcggcggaaacgtccgaagctgaaattcgcgccgcccttggcggccggatcgaaagcgga
aagcagattgtctacgacccggaaaagaatgcattgcgcgcgcgaggctgtgcgcatcgg
cgcaatagccctttcggaaaagcttcttgccgcgccctcgggcgctggcgccgatga
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