Brucella abortus 63 75: DK49_679
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Entry
DK49_679 CDS
T03461
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
babt
Brucella abortus 63 75
Pathway
babt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
babt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK49_679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
babt03019
]
DK49_679
03009 Ribosome biogenesis [BR:
babt03009
]
DK49_679
Enzymes [BR:
babt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DK49_679
Messenger RNA biogenesis [BR:
babt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DK49_679
Ribosome biogenesis [BR:
babt03009
]
Prokaryotic type
rRNA processing factors
DK49_679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Ogr_Delta
Motif
Other DBs
NCBI-ProteinID:
AIJ79834
UniProt:
A0AAE9LBU2
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All DBs
Position
1:complement(669714..672482)
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AA seq
922 aa
AA seq
DB search
MSNKMLIDASHPEETRVIVTRGNKIEEFDFESEHKKQLKGNIYLARVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPVADRLALLEAEAKAARAEDDEDEPRAKSDRSERNDRAR
RNRRRGGRRDGQNGEAQANGADKDLPAAEPVGPGFADYVAGTPAAALTQKGDIISEALDN
GDDDDVENEEDMVESVGSEDALEELPTHTRTHRRQYNIQEVIKRRQILLVQVVKEERGNK
GAALTTYLSLAGRYSVLMPNTARGGGISRKITNPQDRKRLKEIVKELEVPQGMGVILRTA
GANRTKAEVKRDYEYLMRLWENVRTLTLQSTAPALVYEEGSLIKRSIRDIYNKDITEILV
SGENGYREAKDFMRMLMPSHAKVVQPYRDHIPIFTRNGVEAQLDRMLVPQVTLKSGGYLI
INQTEALVAIDVNSGRSTREHSIEDTALQTNLEAAEEVARQLRLRDLAGLIVVDFIDMEE
KRNNRAVEKKMKECLKDDRARIQVGRISHFGLLEMSRQRIRASVLESTMQVCPHCGGTGH
IRSDSSMALHIIRGIEDYLLRHSGFDIHVRTPAASALYVLNHKRQILADLEGRFGVEISI
DADESVGNQHFVIDKGAPSTRPVTPSAVQPMVYEDDIEDPEIPVEEDETEEEARTDVQAG
EERSEENDRKRRRRRRRRGGRERDGRDLSAQEEAVSEEASEEDNEIDQANEAVSSASMNE
EDRRKKRRRGRRGGRKNRREDDNRARRIPDPEFVGYTPVLPVKAEESIGEVVETVETVEA
PVVEAAPEEKPEKPARKPRARKTAKTEEAAEAVITAEAEEKPEKPARKTRTRKKAVDEAP
ADEAAAPAEEVVPEKPKRRTRKAAAKPVVEAEDVAEVKETVAAETQVETIAEPKSTEPVV
TSSESEDRKPKRSGWWQKKGFF
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaaaatgcttatagatgcctcccacccggaggagacccgcgttatcgtcacg
cgcggcaacaagattgaagaattcgatttcgaatcggaacataagaaacagctgaaaggc
aatatctacctcgcacgcgtcacccgtgtcgaaccgtcgcttcaggctgcattcgtggaa
tatggcggcaatcgccatggcttcctggcattttccgaaattcatcccgactattaccag
attccggtcgccgaccgccttgccctgcttgaagcggaagccaaggccgcacgcgctgaa
gacgacgaggacgaaccgcgcgccaaaagcgaccgcagtgaacgcaacgaccgcgcgcgc
cgcaatcgccgccgtggcggccgccgcgatggccagaatggcgaagcgcaggcaaacggt
gctgacaaggacctgccggcggcagagccggtcggtccgggctttgcggattacgttgcg
ggaacgcccgccgctgctctcacgcagaaaggcgatataatttccgaagccctcgacaat
ggcgatgacgatgatgtcgagaacgaagaggacatggtcgaatcggtcggctcggaagat
gctctggaagagcttccgacccacacccgcacccatcgccgccagtataatattcaggaa
gtcatcaagcgccgccagattcttctggtgcaggtggtcaaggaagagcgcggcaacaag
ggcgctgctctcaccacctatctttcgcttgccggacgttattcggtactgatgcccaac
accgcgcgcggtggcggcatttcgcgcaagatcaccaatccgcaggaccgcaagcgcctg
aaagagatcgtgaaggaactcgaagtgccgcagggcatgggtgtgatcctgcgcacggca
ggcgcaaaccgcaccaaggcggaagtcaagcgcgactatgaatatctgatgcgcctgtgg
gaaaacgtgcgcacgctgacgctgcaatcgacagcgcccgcgctcgtctatgaagaaggc
agcctcatcaagcgctctatccgtgatatttacaacaaggacatcacggaaatactcgtt
tccggcgagaacggctatcgcgaggccaaggatttcatgcgtatgctcatgccgagccat
gcgaaggtcgtccagccttaccgcgatcatattccgatcttcacgcgcaacggcgtggaa
gcgcagcttgaccgtatgcttgtgccgcaggtgacgctcaaatcgggcggctacctcatc
atcaaccagacggaagccctggttgccatcgacgtcaattcgggccgctcgacccgcgaa
cattcgattgaggacaccgcgcttcagaccaatctggaagcagccgaagaagttgcgcgc
cagttgcgccttcgcgaccttgcgggcctgatcgtcgttgacttcatcgacatggaagaa
aagcgcaacaatcgcgctgtcgaaaagaagatgaaggaatgcctgaaggatgaccgcgcc
cgcatccaggtgggccgcatctcgcatttcggccttctggaaatgtcgcgccagcgcatc
cgcgcatcggttctggaaagcaccatgcaggtctgcccgcattgcggcggcaccggacat
atccgttcggattcctccatggcgctccatatcatccgtggtatcgaagactatctgctg
cgccattcgggctttgatattcatgtccgcaccccggcagcgtccgcactttatgtgctc
aatcacaagcgccagattctggccgatctggaggggcgctttggcgtcgagatcagcatt
gatgccgacgaaagtgtaggaaaccagcactttgtcattgataagggtgcgccttctacc
cgccccgtcaccccgtcggcagtacagccgatggtctatgaggacgatatcgaagaccct
gaaatcccggtcgaagaagacgagaccgaagaagaagcaaggaccgatgttcaggctggc
gaagagcgcagcgaagaaaacgaccgcaagcgccgtcgtcgtcgccgtcgtcgcggtggc
cgcgaacgtgacggtcgtgatctgtccgcgcaggaagaagccgtttcggaggaagcatcc
gaagaggataatgaaatcgatcaggccaatgaggccgtgtcatccgcttccatgaacgag
gaagatcgccgcaagaagcgtcgtcgcggccgccgtggcggacggaagaaccggcgtgaa
gacgacaaccgtgcgcgcagaattcctgatccggaattcgtcggttacacacctgttctg
ccggtaaaggccgaagaaagcatcggcgaagtagtggaaacggttgaaaccgtggaagca
cctgtcgttgaggccgcgccggaagaaaagcctgaaaagcccgcccgcaagccgcgtgcc
cgcaaaacagcaaaaaccgaggaagcagcggaagcagtgatcactgcggaggctgaggaa
aagcctgaaaagcccgcccgcaaaacgcgcacgcgcaagaaggctgtcgacgaagcgcct
gcagatgaagccgcagcgcccgccgaggaagtggtacctgaaaagccgaagcgccgtaca
cgcaaagctgccgccaagccggttgtggaagccgaagacgttgccgaggtgaaggaaacg
gttgcggcagaaacgcaggtggaaaccatcgcggaaccgaaaagcacagagccggtcgta
acctccagcgagagcgaagaccggaagccgaagcgttcgggctggtggcagaagaagggc
tttttctaa
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