KEGG   Brucella abortus bv. 9 C68: DK53_1982
Entry
DK53_1982         CDS       T03474                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
babu  Brucella abortus bv. 9 C68
Pathway
babu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:babu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DK53_1982 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:babu03021]
    DK53_1982 (rho)
   03019 Messenger RNA biogenesis [BR:babu03019]
    DK53_1982 (rho)
Transcription machinery [BR:babu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     DK53_1982 (rho)
Messenger RNA biogenesis [BR:babu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     DK53_1982 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_22 AAA_25 S1CSD-TOTE-2 AAA DUF6360 Fungal_virus_P2_C
Other DBs
NCBI-ProteinID: AIJ61814
LinkDB
Position
1:complement(2020838..2022103)
AA seq 421 aa
MQEMKLQELKNKTPVELLAFAETLEVENASAMRKQELMFAILKKLAAQDVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYISPSQLRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFEDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAA
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRADLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKSNAEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaggaaatgaaactacaagaactgaaaaacaagacaccggtggagcttctggccttt
gccgagacgcttgaggtcgaaaatgcgagcgccatgcgcaagcaggaactgatgttcgcg
atcctcaagaagctggcagcccaggatgtcgaaatcatcggtgagggcgttgtcgaggtg
ctacaggacggttttggcttcctgcgctcagccgatgccaattacctacccggtccggac
gatatctatatttcgccatcgcaactgcgccgtttttcgctcaagaccggcgatacggtt
gaaggcccgatccgcgggcccaaggaaggcgagcgctattttgcgctgctcaaggtcaat
acgatcaattttgaagatccggaaaagatccgtcacaaggttcacttcgacaatctgacg
ccgctctacccaaacgagcgtttcaagatggagctggaagttccgacctcgaaagatctt
tcgccgcgtgtcatagatctggttgcgccgctcggcaaaggccagcgcggcctgatcgtc
gcgccgccgcgcaccggtaagactgttcttctccagaacatcgcccattcgatcactgca
aatcacccggaatgctatcttatcgttctcctgatcgatgagcgtccggaagaagtgacc
gacatgcagcgttcggtgaagggtgaggttatttcctcgaccttcgatgaaccggccgcc
cgccatgttcaggttgctgaaatggtcattgaaaaggcaaaacgccttgtcgaacatggc
cgtgacgtcgttatcctgctcgactcgatcacgcgccttggccgcgcctacaatacggtc
gtgccgtcttccggcaaggtgctgaccggtggtgtggacgccaatgcgctacagcgcccg
aagcgcttctttggtgctgcgcgtaatatcgaggaaggcggctcgcttaccattatcgca
actgccctgatcgataccggcagccgcatggacgaagtgatctttgaagaattcaaaggc
acgggtaactcggaaatcgttctcgaccgcaaggttgccgacaagcgcatcttcccggct
atggatattctcaagtccggtacgcgcaaggaagatctgctggttccgcgcgccgatctc
cagaagattttcgtgctgcgccgcattcttgcacccatgggcacgaccgatgcgatcgaa
ttcctcatcgacaagctcaagcagacgaagagcaatgccgaattcttcgattcgatgaat
acgtaa

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