Brucella abortus bv. 9 C68: DK53_2082
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Entry
DK53_2082 CDS
T03474
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
babu
Brucella abortus bv. 9 C68
Pathway
babu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
babu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK53_2082 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
babu03019
]
DK53_2082 (pnp)
03016 Transfer RNA biogenesis [BR:
babu03016
]
DK53_2082 (pnp)
Enzymes [BR:
babu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DK53_2082 (pnp)
Messenger RNA biogenesis [BR:
babu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DK53_2082 (pnp)
Transfer RNA biogenesis [BR:
babu03016
]
Prokaryotic type
tRNA degradation factors
DK53_2082 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AIJ60519
LinkDB
All DBs
Position
1:2121574..2123718
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AA seq
714 aa
AA seq
DB search
MFNTHKVEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQH
DLENNPDILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVA
GTSEAVLMVESEAQELPEDVMLGAVMFGHKSFQPVIDAIIKLAEVAAKEPRDFQPEDLSE
LEAKVLAVVENDLREAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEMSAEQFATIFK
HLQAKIVRWNILDTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGT
GEDEQMIDALTGTYKESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAA
EQFPYTIRAVSEITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFAVL
SDILGDEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMA
KAISSSRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSNGKEIEAAKKWIHSIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLAADR
VAKTTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKEIVAEKKKEEVDAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatacccataaagttgaaatcgaatggggcggacgtccgctcacactcgaaacc
ggcaagattgcccgtcaggctgacggcgctgttctcgccacctatggcgaaaccgccgtt
ctcgcaactgtcgtttctgccaaggaaccgaagccgggccaggacttcttcccgctgacc
gtcaattatcaggaaaagacctatgcagccggcaagattcccggcggctatttcaagcgt
gaaggccgtccgagcgaaaacgaaaccctcgtttcgcgcctgatcgaccgtccgatccgc
ccgcttttcgttgacggctacaagaacgacacgcaggtcgtcattaccgttctccagcac
gatctggaaaacaacccggacatcctgtcaatggttgcggcatctgccgccctcaccatt
tcgggcgtgcctttcatgggtccgatcagcggcgcgcgcgttggttatatcgatggcgaa
tatgtcctgaacccgaatatcgatgaaatgccggaatccaagctcgatctggtggttgcc
ggtacgtcggaagcggttctgatggtcgaatcggaagcgcaggaactgcccgaagatgtc
atgctcggcgccgtcatgtttggccacaagagcttccagccggtgatcgatgcgatcatc
aagcttgccgaagttgccgccaaggaaccgcgtgacttccagccggaagacctgtcggaa
ctggaagccaaggtgctggccgttgtggaaaacgacctgcgcgaagcttacaagatcact
gaaaagcaggcgcgctacgcagccgttgatgccgccaaggccaaagccaaggaacatttc
ttccccgaaggcgtggaagaaaccgaaatgtcggcggaacagttcgcgaccattttcaag
catctgcaggccaagatcgttcgctggaacattctcgacacgggcaaccgtatcgatggc
cgtgacctttcgaccgttcgtccgatcgtttcggaagtcggcatcctgccgcgcacccac
ggttccgcgctcttcacccgcggtgaaacgcaggccatcgtcgttgccacgctcggcacc
ggcgaagacgaacagatgatcgatgcgctgacgggaacctacaaggaatccttcatgctg
cattacaatttcccgccctattcggtcggtgaaacgggccgcatgggttctccgggccgc
cgcgaaatcggccatggcaagcttgcctggcgcgcaatccatccgatgctgcctgccgcc
gaacagttcccctatacgatccgcgctgtttccgaaatcacggaatcgaacggttcttcc
tcgatggcaaccgtttgcggcacctcgctggcgctgatggatgccggtgtgccgatcgtg
cgccccgtcgccggtatcgccatgggtctcatcaaggaaggcgaacgtttcgccgttctt
tccgacattctcggcgatgaagatcacctcggcgacatggacttcaaggtggccggtacc
gaattcggcatcacatcgctacagatggacatcaagatcgacggtatcaccgaagagatc
atgaaggtcgctctggaacaggcaaagggtggccgcgttcacattctcggcgaaatggcc
aaggccatctcctcctcgcgcgctgaactgggcgagtttgccccgcgcatcgaagtgatg
aacattccgaccgacaagatccgcgacgtgattggctccggcggcaaggttatccgcgag
atcgtggaaaagaccggcgccaagatcaacatcgaggacgatggtacggtcaagatcgcg
tcgtcgaacggcaaggaaatcgaagccgccaagaagtggattcactccattgtggctgaa
ccggaagtcggcgaaatctatgaaggcacggtcgtcaagaccgccgatttcggcgctttc
gtgaacttcttcggcccgcgtgacggtctggttcatatctcgcagctcgctgccgaccgt
gttgccaagaccaccgatgtggtcaaggaaggccagaaggtctgggtcaagctcatgggc
ttcgacgaacgcggcaaggttcgcctgtcgatgaaggtcgtcgatcaggaaaccggcaag
gaaatcgttgctgaaaagaagaaggaagaagttgacgctgaataa
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