Burkholderia ambifaria MC40-6: BamMC406_0111
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Entry
BamMC406_0111 CDS
T00684
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BamMC406_0111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_0111
Enzymes [BR:
bac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BamMC406_0111
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BamMC406_0111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_16
AAA_30
Zn-ribbon_GIR1
DUF5817
ADDB_N
Zn_ribbon_6
DZR
Motif
Other DBs
NCBI-ProteinID:
ACB62613
UniProt:
B1YQL9
LinkDB
All DBs
Position
1:124749..127010
Genome browser
AA seq
753 aa
AA seq
DB search
MADTYLRVALDHPLATLFDYRCDVQPAPAPGTLVQVPFGKRQVVGLVCEVTTHTDVPPSR
LRAIDAICTELPSLAPDWLALVSFAADYYQRGRGEVALPALPQALRDAQRWGRLLAPEVR
YRLSEAGRAALPDALPARGAALRRLAQALADTDSLTLPDVRALHPKAVATLDDWAARGWV
AIEEIGWADAPVPKAVDNLSTTSGRAVPPALTDQQAEALDAIRAAQGFAPFLLHGVTGSG
KTEVYLHALAALLDARPDAQALVLVPEINLTPQFEAAFRARFAGTLADDAIVTLHSGLAE
GERARNWLAAHTGRARIVLGTRLAVLASLPTLALIVVDEEHEPAYKQQEGLRYSARDLAV
WRAKHLGIPVVLGSATPSLESWWLAEQGRYTRLTLSRRAVADATLPTVRLIDLEEERRRG
RASLGGLSGPLVAALKARLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHK
PEHALRCHHCGWEARIPRSCPECGNVDIAPLGRGTQRIEEALAEAVTGARILRIDADSTR
RKGSAQALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFA
QLMQVSGRAGRAGLPGEVLVQTRYPRHALYHALGRQDYVGFANSTLGERRDAHLPPFVYQ
ALLRAEGRTLDAALAFLLQAAAALPGLPGADRVTVYDAVPMTIVKVANVHRAQLLLESAS
RAALQHALRAWQPELRALKGVHRWSLEVDPLDI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacctacctgcgcgtcgcgctcgaccacccgctcgccaccctgttcgactac
cgctgcgacgtccagccggcgcccgcgcccggcacgctcgtccaggtgccgttcggcaag
cggcaagtcgtcgggctcgtatgcgaagtgacgactcacaccgacgtgccgccgtcccgg
ttgcgcgcgatcgacgcaatctgtaccgaactgccgtcgctggcgcccgactggctcgcg
ctcgtgtcgttcgcggccgattactaccagcgcggccgcggcgaagtcgcgctgccggcg
ctgccgcaggcgttgcgcgatgcgcagcgctgggggcggctgctcgcgccggaggtccgc
taccggctgagcgaagccggccgcgccgcgcttcccgacgcactgcccgcgcgcggggcc
gcgttgcggcggctcgcgcaggcgctcgccgacaccgattcgctgacgttgcccgacgtg
cgcgcgttgcacccgaaggcggtcgccacgctcgatgactgggcggcgcgcggctgggtc
gcgatcgaggagatcggctgggccgatgcgcctgtgcccaaagctgtggataacctgtcg
acaaccagtggacgagctgtgccgccggcgctcaccgaccagcaggccgaggcgctcgac
gcgatccgcgccgcgcagggtttcgcgccgttcctgctgcatggcgtgacgggcagcggc
aagaccgaggtctatctgcatgcgcttgccgcgctgctcgacgcgcggcccgacgcgcag
gcgctcgtgctcgtgcccgaaatcaacctgacgccgcagttcgaggccgcgtttcgcgcg
cgcttcgcgggcaccctcgcggacgacgcgatcgtcacgctgcacagcgggctcgccgag
ggcgaacgcgcgcgcaactggctcgccgctcacacgggccgcgcgcggatcgtgctcggc
acgcggctcgcggtgctcgcgtcgctgccgacgctcgcgctgatcgtcgtcgacgaggag
cacgagcccgcgtacaagcagcaggaagggttgcgctattcggcgcgcgacctcgcggtg
tggcgcgcgaaacatctcggcattccggtcgtgctcggttccgcgacgccgtcgctcgaa
agctggtggctggccgagcaggggcgctacacgcggctcacgctgtcgcgccgcgcggtg
gccgacgcgacgctgcccaccgtgcggctgatcgatctcgaagaggagcggcggcgcggg
cgcgcgtcgctgggcgggctgtcggggccgctcgtcgcggcgctgaaggcgcgcctcgag
cgcggcgaacagagcctcgtgttcctgaatcggcgcggttacgcgccgcagctcgcgtgc
gacgcgtgcggctgggtcgccggttgcccgcgctgcagcgcctacgtcgtgctgcacaag
cccgagcatgcgctgcgctgccatcactgcggctgggaagcgcgtattccgcgctcgtgc
ccggaatgcgggaacgtcgacatcgcgccgctcgggcgcggcacgcagcgcatcgaggaa
gcgctcgccgaggccgtgacgggcgcgcggatcctgcggatcgacgcggacagcacacga
cgcaagggcagcgcgcaggcgttgttctcggacgtgcacgccggtgaagtcgacatcctg
gtcggcacgcagatgatcgcgaaggggcacgatttccagcgcgtgtcgctcgtcggcgtg
ctcaatgcggataccgcgctgttctcgcacgacttccgcgcgagcgagcggctgttcgcg
cagctgatgcaggtgagcggtcgcgccgggcgcgccgggctacccggcgaggtgctggtg
cagacgcgttatccgcgtcacgcgctgtatcacgcgctcggccggcaggattacgtcggc
ttcgcgaattcgacgctcggcgagcgccgcgacgcgcacctgccgccgttcgtctaccag
gcgctgctgcgcgccgaaggacgcacgctcgacgcggcgctcgcgttcctgctgcaggcc
gcggccgcgctgccggggctgccgggcgccgatcgggtgaccgtatacgacgcggtgccg
atgacgatcgtgaaggtcgcgaacgtccaccgcgcgcagctgctgctcgaaagcgcgtcg
cgggcggccctgcagcatgcgttgcgcgcctggcagccggagctgcgtgcgctgaagggc
gtacaccggtggagcctcgaggtcgatccgctggatatctga
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