Burkholderia ambifaria MC40-6: BamMC406_0907
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Entry
BamMC406_0907 CDS
T00684
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac00630
Glyoxylate and dicarboxylate metabolism
bac00680
Methane metabolism
bac01100
Metabolic pathways
bac01120
Microbial metabolism in diverse environments
bac01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BamMC406_0907
09102 Energy metabolism
00680 Methane metabolism
BamMC406_0907
Enzymes [BR:
bac01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
BamMC406_0907
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_6
Fer4_21
Fer4_17
Fer4_9
Fer4_Nqo3
Fer4_8
Fer4_16
Fer4_NDSU1
Fer4_2
Fer4_15
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
ACB63398
UniProt:
B1YV15
LinkDB
All DBs
Position
1:complement(997647..1000598)
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AA seq
983 aa
AA seq
DB search
MSLDTNNVRQGGCGSGQCACKSAAQARAFDPFDDTDYGTPQRHADTDVTLEIDGQPVTVP
AGTSVMRAAIEAGVNVPKLCATDSLEPFGSCRLCLVEIEGRRGYPASCTTPAEAGMKVRT
QSDRLQSLRRNVMELYISDHPLDCLTCPANGDCELQDMAGVVGLREVRYGFDGANHLREQ
KDESNPYFAYDPSKCIVCNRCVRACEETQGTFALTIAARGFESRVAAGESESFMASECVS
CGACVAACPTATLQEKSVVRLGQAEHSVVTTCAYCGVGCSFKAEMKGTQVVRMTPHKNGL
ANEGHACVKGRFAWGYATHKDRITKPMIREKITDPWREVSWDEALTYAATQFRKLQQKYG
RDSIGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKATLGESAGTQT
FASVDHADVIVVMGANPTDGHPVFGSRLKRRIREGAKLIVIDPRRIDVVDGPHVKAAHHL
QLRPGTNVAIVNALAHVIVTEGLVADAFVAERCEARAFEQWRDFVSRAENSPEATADATG
VPAEVVREAARLYATGGNAAIYYGLGVTEHAQGSTTVMGIANLAMATGNIGREGVGVNPL
RGQNNVQGSCDMGSFPHELPGYRHIGDDSVRALFEQAWSATLQPEPGLRIPNMFDAALDG
SFKGLYCQGEDIVQSDPNTQHVAAALSSMECVVVQDIFLNETAKYAHVLLPGSTFLEKDG
TFTNAERRISRVRKVMPPLAGYADWEVTLLLSQALGYDMHYTHPSEIMDEIARLTPTFSG
VSYAKLDALGSIQWPCNEQAPDGTPTMHIDAFVRGKGRFVITQYIPTPEKVTQRYPLILT
TGRILSQYNVGAQTRRTENVQWHEEDRLEIHPHDAEDRGIRTGDWVGIESRAGQTVLRAL
VSDRMQPGVVYTTFHFPESGANVITTDSSDWATNCPEYKVTAVQVMPVAQPSDWQRAYAR
FNSEQLDLLERRAAAPATVTTGK
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgacacgaacaacgtccgccaaggcggctgcggctcaggccaatgcgcgtgc
aagagcgccgcccaggcgcgcgccttcgatccgttcgacgacaccgactacggcacgccg
caacggcatgccgacaccgacgtcacgctcgaaatcgacggccagccggtgacggtgccg
gccggcacgtcggtgatgcgcgccgcgatcgaagccggcgtcaacgtgcccaagctctgc
gcgaccgattcgctcgaaccgttcggctcgtgccgtctgtgcctcgtcgaaatcgaaggc
cggcgcggctatccggcatcgtgcacgacgcccgccgaagccgggatgaaggtgcgcacg
cagtcggaccggctgcagtcgctgcgccgcaacgtgatggagctgtacatctccgaccac
ccgctcgactgcctcacctgccccgccaacggcgactgcgagctgcaggacatggcgggc
gtcgtcggcttgcgcgaagtgcgctacggcttcgacggcgcgaatcatctgcgcgagcag
aaggacgaatcgaatccgtacttcgcgtacgatccgtcgaagtgcatcgtctgcaaccgc
tgcgtgcgcgcgtgcgaggaaacccaaggcacgttcgcgctgacgatcgccgcgcgcggc
ttcgaatcgcgcgtcgccgccggcgaaagtgaatcgttcatggcgtcggaatgcgtatcg
tgcggcgcgtgcgttgccgcctgcccgaccgccacgctgcaggaaaaatccgtcgtccgg
ctcgggcaggccgagcactcggtcgtcacgacctgcgcgtactgcggcgtcggctgctcg
ttcaaggccgagatgaagggcacgcaggtcgtgcgcatgacgccgcacaagaacggtctc
gcgaacgaaggccacgcgtgcgtgaaggggcgcttcgcgtggggctacgcgacccacaag
gaccgcatcacgaagccgatgatccgcgagaagatcaccgacccgtggcgcgaagtcagc
tgggacgaggcgctcacctacgcggcgacgcaattccgcaagctgcagcagaagtacggc
cgcgattcgatcggcggcatcacgtcgtcgcgctgcacgaacgaggaaacctacctcgtg
cagaagctcgtgcgcgccgcattcggcaacaacaacgtcgacacctgtgcgcgcgtgtgc
cattcgccgaccggctatggcctgaaggcgacgctcggcgaatcggccggcacgcagacc
ttcgcatcggtcgaccacgccgatgtgatcgtcgtgatgggtgcgaacccgaccgacggc
cacccggtgttcggctcgcgcctgaagcggcgcatccgcgaaggcgcgaagctgatcgtg
atcgatccgcgccgcatcgacgtggtcgacggcccgcacgtgaaggccgcgcaccacctg
cagctgcgccccggcaccaacgtcgcgatcgtcaatgcgctcgcgcacgtgatcgtcacc
gaagggctcgtcgccgacgcgttcgtcgccgagcgctgcgaagcgcgcgcattcgagcaa
tggcgcgacttcgtgtcgcgtgccgagaactcgcccgaagcgaccgccgatgcgacgggc
gtgccggccgaagtggtgcgcgaagccgcgcggctctatgcgaccggcggcaacgccgcg
atctactacggcctcggcgtgaccgaacacgcgcaaggctcgacgacggtgatgggcatc
gcgaacctcgcgatggcgaccggcaacatcggccgcgaaggcgtcggcgtcaatccgctg
cgcggccagaacaacgtgcagggctcgtgcgacatgggctcgttcccgcatgaactgcca
ggctaccgccacatcggcgacgacagcgtgcgcgcgctgttcgaacaggcatggtcggcc
acgctgcaaccggaaccggggctgcgcatcccgaacatgttcgacgcggcgctcgacggc
agcttcaaggggctctactgccagggcgaggacatcgtccagtcggacccgaacacgcag
cacgtcgccgccgcgctgtcgtcgatggaatgcgtcgtcgtgcaggacatcttcctcaac
gaaaccgcgaaatacgcgcacgtgctgctgccgggctcgacgttcctcgagaaggatggc
acgttcacgaacgcggaacgccgcatctcgcgcgtgcgcaaggtgatgccgccgctcgcg
ggctacgcggactgggaagtgacgctgctgctgtcgcaggcgctcggctatgacatgcat
tacacgcatccgtcggaaatcatggacgagatcgcacggctcacgccgaccttctcgggc
gtgtcgtacgcgaagctcgacgcgctcggcagtatccagtggccgtgcaacgaacaggca
ccggacggcacgccgacgatgcacatcgacgcgttcgtgcgcggcaagggccgctttgtg
atcacgcagtacattccgacgccggaaaaggtcacgcagcgctatccgctgatcctgacc
acgggccgcatcctgtcgcaatacaacgtcggtgcgcagacgcgccggaccgagaacgtc
cagtggcacgaagaggaccgcctcgagatccacccgcacgacgcggaggatcgcgggatc
cggaccggcgactgggtcggcatcgaatcgcgggcgggccagacggtgttgcgcgcgctc
gtgtccgatcgcatgcagccgggcgtcgtgtacacgacgttccactttcccgaatcgggc
gcgaacgtgatcacgacggacagctccgactgggcgacgaactgcccggaatacaaggtc
acggccgtgcaggtgatgccggtcgcgcagccgtccgactggcagcgtgcatacgcgcgc
ttcaactcggagcagctcgacctgctcgagcgtcgcgcagccgcgccggccaccgtgacg
acgggcaagtga
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