Burkholderia ambifaria MC40-6: BamMC406_0928
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Entry
BamMC406_0928 CDS
T00684
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bac03032
]
BamMC406_0928
03036 Chromosome and associated proteins [BR:
bac03036
]
BamMC406_0928
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_0928
DNA replication proteins [BR:
bac03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BamMC406_0928
Chromosome and associated proteins [BR:
bac03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BamMC406_0928
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BamMC406_0928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ACB63419
UniProt:
B1YV36
LinkDB
All DBs
Position
1:1021461..1021784
Genome browser
AA seq
107 aa
AA seq
DB search
MTKSELVAQLALRFPQLVLKDADFAVKTMLDAMSDALSKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKFVPHFKPGKELRERVDGRAGEPLKADDPDDER
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcgcagctggcactgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaaaacgatgctcgatgcgatgtccgacgccctgtcgaaaggg
catcgcatcgaaattcggggtttcggcagcttcggcctcaaccgtcgcccggcgcgcgtc
ggacgcaacccgaagtcgggggagaaagtgcaggtgcccgagaagttcgtgcctcacttc
aagcccggcaaggaattgcgcgaacgcgtcgacggccgcgccggcgagccgctgaaagct
gatgatccggacgacgagcgttga
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