Burkholderia ambifaria MC40-6: BamMC406_1016
Help
Entry
BamMC406_1016 CDS
T00684
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BamMC406_1016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_1016
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BamMC406_1016
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BamMC406_1016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ACB63507
UniProt:
B1YVM6
LinkDB
All DBs
Position
1:1106589..1107428
Genome browser
AA seq
279 aa
AA seq
DB search
MGTNDAPTSTEDAVTAGANDAPLPAPPEPPRRKARRATSRTSDFRVAEQPAFVLHSYPYR
ETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVG
GMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLTLTRLAHGEPAVQVLRSFERV
LLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDD
YHRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggtacgaatgacgcgccgacgtcgaccgaagacgcggtgaccgccggcgcgaacgac
gcgccgctgccggcaccgcccgaaccgccgcgtcgcaaggcgcggcgcgcgacgtctcgc
acgtccgatttccgcgtcgccgagcagccggcgttcgtgctgcacagctatccgtaccgg
gaaacgagcctgatcatcgacgtgctcacgcgcgatcacggccgcctcgcgctcgtcgcg
aagggcgcgaagcgcccgcactccgcgctacgcggcgtgctgcagacgttccagccgctg
ctgctgtcctggtcgggcaaatccgaagtgcgcacgctgacgggcgccgagtgggtgggc
gggatgctgccgctcggcggcgacgggctgttgtgcggcttctacgtgaacgagctgctc
gtgaaattctgcgcgcgcgaggatccgcagccgccgcttttcaatcattacgtgctgacg
ctcacgcgcctcgcgcacggcgaacccgcggtgcaggtgctgcgctcgttcgaacgcgtg
ctgctgcgcgagaccggctatgcgatggcgctgaaccgcacggtcgcgcgccgcgcggtc
gaacccgatcgacgctacgtgttcgatcccgagcgcggcgtgcgcaatgccgacgacgac
gtgccgtcgcactggccggtgattaccggacagacgttgctcgacatggagcaggacgat
taccatcgagcccagacggttgcgcaaagcaagacgctgatgcgcttcctgctgaacacc
tatctcggcggtacgccgcttgccacgcgtcagatcctgatcgacctgcaaaacctatga
DBGET
integrated database retrieval system
