Burkholderia ambifaria MC40-6: BamMC406_1023
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Entry
BamMC406_1023 CDS
T00684
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BamMC406_1023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_1023
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BamMC406_1023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH
HHH_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ACB63514
UniProt:
B1YVN3
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All DBs
Position
1:1113529..1115583
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AA seq
684 aa
AA seq
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MTSPEAVDIPFEPKKILAQLPHMPGVYRYYDTAGAVLYVGKARDLKKRVSSYFTKTQLSP
RIAMMVTRIARIETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTAHRFPR
MAYYRGSVDKQNQYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFNNRTRPCLLHQIGRC
TAPCVGAISADDYAIDVSNAARFLLGRQSEVMKELEQKMHAFAAELKFEQAAAVRNQMSS
LATVLHQQAIEVGSDSDVDILAVVAQGGRVCVNLAMVRGGRHLGDKAYFPAHVESALTLA
EGGLGDEADGADGADEAAAALPGEPADEAAAARDAASAASSASSASVEAEVLDAFIAQHY
LGNRVPPVLVVSHAPASRDLLELLSEQAGHKVSLVRQPQGQRRAWLSMAEQNARLALARL
LSEQGSQQARTRALAETLSFECDDLAMLRIECFDISHTMGEATQASCVVYHHHKMQSGEY
RRYNITGITPGDDYAAMRQVLTRRYEKMVEQAAQAAAADDAAGIDGESTRQAEASSLLPN
IVLIDGGKGQVEIARQVFTELGLDTSMLVGVAKGEGRKVGLETLVFADGRTPLELGKESA
ALMLVAQIRDEAHRFAITGMRAKRAKARQTSRLEELEGVGAKRRQRLLARFGGLRGVVAA
SVEELASVEGISHALAEQIYKQLH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacatctccagaagccgtcgacatcccgttcgaaccgaagaagatcctcgcccagttg
ccgcacatgccgggcgtctaccgctactacgacacggcgggcgccgtgctttacgtcggc
aaggcacgcgacctgaagaagcgcgtgtcgagctatttcacgaagacgcagctgtcgccg
cgcatcgcgatgatggtcacgcgcatcgcgcgcatcgagacgaccgtcacgcgctcggag
gccgaggcgctgctgctcgagaacaacctgatcaaggcgctcgcgccgcgctacaacatc
ctgtttcgcgacgacaagtcgtatccgtacctgaagctcaccgcgcaccgctttccgcgc
atggcctactaccgcggctcggtcgacaagcagaaccagtatttcggaccgttccccagc
gcgtgggccgtgcgcgagagcatccagatcctgcagcgcgtcttccagttgcgcacctgc
gaggattccgtgttcaacaaccgcacgcggccgtgcctgctgcatcagatcgggcgctgc
acggcgccgtgcgtgggcgcgatttccgcggacgattacgcgatcgacgtgtcgaacgcc
gcgcgcttcctgctgggccggcagtcggaagtcatgaaggagctcgagcagaagatgcac
gcgttcgcggccgagctgaagttcgagcaggcggcggccgtgcgcaaccagatgagttcg
ctcgcgacggtgctgcaccagcaggcgatcgaggtcggcagcgacagcgacgtcgacatc
ctggcggtggtcgcgcagggcggccgtgtgtgcgtgaacctggcgatggtgcgcggcggc
cggcatcttggcgacaaggcttatttcccggcgcatgtcgaaagtgcgttgacgcttgcc
gaaggcgggctcggcgacgaagccgacggcgcggatggtgcggacgaagccgccgcggcg
ttgcccggcgagcccgcggacgaagctgccgccgcgcgtgacgcggcgtcggcggcgtca
tcggcatcgtcggcatcggtcgaggccgaggtgctcgatgcgttcatcgcgcagcactat
ctcggcaatcgcgtgccgcccgtgctggtcgtgagccatgcgcccgcaagccgcgacttg
ctcgagctgctgtccgagcaggccggtcacaaggtatcgctggtgcggcagccgcagggg
cagcggcgcgcatggctgtcgatggctgagcagaatgcccggctcgcgcttgcgcggctg
ctgtccgagcagggctcgcagcaggcgcgcacgcgcgctctcgcggagacgctcagcttc
gagtgcgacgatctcgcaatgctgcggatcgagtgtttcgacatcagtcacacgatgggc
gaggcgacgcaggcgtcgtgcgtggtctaccaccatcacaagatgcagtcgggcgagtac
cgtcgctacaacatcaccggcatcacgccgggcgacgattacgcagccatgcggcaggtg
ctgacgcgccgctacgagaagatggtcgagcaggccgcgcaggcggcggccgccgacgac
gcggccggcatcgatggcgaatcgacgcgccaggccgaggcatcgagtttgttgccgaac
atcgtgctgatcgacggcggcaagggacaggtcgagatcgcgcggcaggtgttcaccgag
cttgggctcgacacatcgatgctggttggcgtcgcgaagggcgaggggcgcaaggtcggc
ctcgagacgctcgtgttcgcggacggccgcacgccgctcgaactcggcaaggagagtgcc
gcgctgatgctcgtcgcgcagatccgcgacgaggcgcaccgctttgcgatcaccgggatg
cgcgcgaagcgggcgaaggcgcgccagacgtcgcggctggaggagctcgaaggggtcggc
gcgaaacggcgtcagcggctgctcgcgcggttcggcgggctgcgcggggtggtcgccgcg
agcgtcgaggaactggcgagcgtcgagggcatctcgcacgcgctcgccgagcagatctac
aagcagcttcactga
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