Burkholderia ambifaria MC40-6: BamMC406_1173
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Entry
BamMC406_1173 CDS
T00684
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03030
DNA replication
bac03430
Mismatch repair
bac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BamMC406_1173
03430 Mismatch repair
BamMC406_1173
03440 Homologous recombination
BamMC406_1173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bac03032
]
BamMC406_1173
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_1173
Enzymes [BR:
bac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BamMC406_1173
DNA replication proteins [BR:
bac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BamMC406_1173
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BamMC406_1173
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACB63664
UniProt:
B1YMV0
LinkDB
All DBs
Position
1:complement(1295782..1296516)
Genome browser
AA seq
244 aa
AA seq
DB search
MRQIILDTETTGLNPRTGDRLIEIGCVELLNRRLTGNNLHIYVNPERDSDPGALAVHGLT
TEFLSDKPKFAEVVDQIRDFVKGAELIIHNAPFDLGFLDAEFARLDLPPFTEHCGGVIDT
LVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQDSLVIDML
DDAGADGGAANGQRVSLASLALPVLAASDDELAAHQTQLDELDKSVKGTCVWRQSAEVDT
AEAA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagatcattctcgataccgaaaccaccggcctgaacccccgcacgggcgaccgc
ctgatcgaaatcggctgcgtcgagctgctgaaccggcggctcaccggcaacaacctgcac
atctacgtgaaccccgagcgcgacagcgatccgggcgcactggccgtgcacggcctcacc
accgagttcctgagcgacaagccgaagttcgcggaagtcgtcgaccagattcgcgacttc
gtgaaaggcgccgagctgatcatccacaacgcgccgttcgacctcggatttctcgacgcc
gaattcgcacggctcgacctgccgccgttcaccgagcattgcggcggcgtgatcgacacg
ctcgtgcaagccaagcagatgttccccggcaagcgcaactcgctcgacgcgctgtgcgac
cggttcggcatcagcaacgcgcaccgtacgctgcacggcgcactgctcgactcggagctg
ctcgccgaggtctatctggcgatgacgcgcggccaggacagcctcgtgatcgacatgctc
gacgacgcaggcgccgatggcggcgcggcgaacggccagcgcgtgtcgctcgcgtcgctc
gccctgccggttctcgcggcaagcgacgacgagctcgccgcccaccagacccagctcgac
gagctcgacaagtcggtcaagggcacctgcgtgtggcgccagtccgccgaggtggacacc
gccgaagccgcctga
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