Burkholderia ambifaria MC40-6: BamMC406_1363
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Entry
BamMC406_1363 CDS
T00684
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03420
Nucleotide excision repair
bac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BamMC406_1363
03430 Mismatch repair
BamMC406_1363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_1363
Enzymes [BR:
bac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BamMC406_1363
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BamMC406_1363
MMR (mismatch excision repair)
Other MMR factors
BamMC406_1363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACB63851
UniProt:
B1YNX7
LinkDB
All DBs
Position
1:1512747..1515110
Genome browser
AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDATDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGENAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDAQEAGWIVEEIRSLINTGMSRSEVAVLYRSNAQSRAI
EHTLMTSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYDCSMAAAIPYVTGKAGTSLGGFATLIAKMRAETQQMSLPETVEYVVRASG
LADFYQGEREGQDRLENLQELVNAATAFVSEEGYGLDAPARSIPLRAGAIAAPELGVDAN
DPSVDVLDPAPLDDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEAGARWGGRSDNAGWGRDWFSRPGGGSREQVVDAAVSA
PLPAFANKQRAADTGFRVGQQVFHTKFGEGTVTALEGNGADAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaatctgaaccctgaacaatacgccgccgtcacgttgccgaac
gaaccggcgctgatcctcgcgggggcgggcagcggcaagacccgcgtgctgatcacccgc
atcgcgtggctgatccagcaggggtacgcgtcgccgcccaccgtgctggccgtcaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcttgtcagcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacgggctgtgcaaccggatgctgcgcacccactgg
cgcgacgccggcctgccgcagaccttccagatcctcgacacggccgatcaattgtccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgagaagtacccgccgaagaatgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgtcccgacaaggtcgacgcgacc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcgtacgaccagcagtgccagcgc
gagggtgtggtcgatttccccgagctgctgctgcgctgctacgagctgctcgcgtacaac
gcaccgctgcgcgcgcactaccaggcacgcttcaggcacatcctcgtcgacgagttccag
gacaccaacaagctgcagtacgcatggctgaagatgctcgcgggcggcgagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacatcctcgacgcggcgaaccagctgatctcgaacaacgcgcaccgc
ctcggcaagaacctgcgcaccgacgccggccacggcgagcccgtgcgcgtgtacgaggcg
agcactgatgcgcaggaagccggctggatcgtcgaggagatccgctcgctgatcaacacc
gggatgtcgcgcagcgaagtcgcggtcctgtatcgcagcaacgcgcaatcgcgcgcgatc
gagcacacgctgatgacttcgggcattccgtatcgcgtgtacggcggcctgcgcttcttc
gagcgccaggaagtgaagcatgcgctcgcgtacctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgcccgcgtcgtgaacttcccgacgcgcgggatcggcgcgcgctccatc
gagcagctcgcggatgccgcgcgcctgtacgactgctcgatggccgccgcgattccgtac
gtgaccggcaaggccggcacgagcctcggcgggttcgcgacgctgatcgcgaagatgcgc
gccgagacgcagcagatgagcctgcccgagacggtcgagtacgtcgtgcgcgcgagcggc
ctcgccgatttctaccagggcgagcgcgaaggccaggaccgcctcgagaacttgcaggaa
ctcgtgaacgcggccaccgcgttcgtcagcgaggaaggctacgggctcgacgcgccggcc
cgctcgatcccgctgcgcgcgggggcgatcgcggcgccggagctcggcgtggacgcgaac
gatccgtcggtcgacgtgctggatccggcgccgctcgacgaccccgcgcagaaccccgac
acgatgacgccgctcgcgggcttcctgtcgcacgcctcgctcgaagccggcgacaaccag
gcgcaggccggccaggacgccgtgcagctgatgacggtgcacgcggcgaagggcctcgaa
ttctcggccgtgttcatcaccggcctcgaggaagggctgttcccgcacgagaacagcgtg
ctcgaatcggacggcctcgaggaagagcgccggctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacggccagacgcgctac
aacgtgcgctcgcgcttcttcgatgaattgccggagcacgtgctgaagtggctcacgccg
aaggtcgaggcgggcgcgcgctggggcggccgctcggacaacgccggctgggggcgcgat
tggttctcgcggccgggtggcggcagtcgcgagcaggtcgtcgacgcggcggtttccgcg
ccgctgccggcgttcgcgaacaagcagcgcgcggccgacaccggctttcgcgtcggccag
caggtgtttcataccaagttcggcgaaggcacggtcaccgcgctcgaaggcaacggagcc
gacgcgaaggcgcaggtgaagttcaagcggcacggcgagaagtggctcgcgctggcagtc
gcgaaactgcaggcggtggaatga
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