Burkholderia ambifaria MC40-6: BamMC406_1424
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Entry
BamMC406_1424 CDS
T00684
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bac03016
]
BamMC406_1424
Enzymes [BR:
bac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BamMC406_1424
Transfer RNA biogenesis [BR:
bac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BamMC406_1424
Prokaryotic type
BamMC406_1424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACB63912
UniProt:
B1YP38
LinkDB
All DBs
Position
1:1580848..1581780
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AA seq
310 aa
AA seq
DB search
MTNAAPQRPRVPRRALDGVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLEADKTYEATMRLGVRTTTGDAEGDVLDTRAVECDRAAVEAALVRF
TGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTIHVLDLLACELPDVTFRVTCS
KGTYVRTLAEDIGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDANEAARDAWLQPVD
ALLSTFPLVRLDEAGAKRFLHGQRLPLSALDPIDAAEGERVRVYDAARLLGVARKANGVL
APERLVVTAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgcagccccccagcgtccgcgcgtgccccggcgcgcactggacggcgtcctc
ctgctcgacaagccggtcggcctgtcgagcaacgacgccctgattcgcgcgaagcgcctg
cttctcgcgaagaaagccggtcacaccggcacgctagatccgctggcctcgggcctgttg
ccgctgtgcttcggcgaggcgacgaagttctcgcaggatttgctggaagcggacaagacc
tacgaagcgacgatgcgtctcggcgtgcgcacaaccaccggcgacgcggaaggcgacgtg
ctcgacacacgcgcggtcgaatgcgaccgcgcggcggtggaagccgcactcgtgcgcttt
actggcgagatcgtgcaggtgccgccgatgtattcggcgctcaagcgcgacggcaagccg
ctgtacgaatatgcgcgcgcgggccagaccgtcgaacgggaaggccgcaacgtgacgatt
catgtactcgacctgctggcctgcgagctgccggacgtgacgtttcgcgtgacctgcagc
aagggcacgtatgtgcgtacgctggccgaagatatcggcgaagcgctcggttgcggcgcg
catctgacgatgttgcgtcgtacgggtgtcggtgcgctgacgctcgagcatgcggtgacg
ctcgacgcgctgtccgacgccaacgaagcggcgcgcgatgcgtggcttcagccggtcgac
gcgctgctgtcgacgtttccgctggtgcgtctcgacgaagccggcgcgaagcggttcctg
catggtcagcgcttgccgctgtcggcgctcgatccgatcgatgcggcggagggcgagcgt
gtgcgcgtgtacgatgcggcacggctgctcggcgtggcgcgcaaggccaacggcgtgctc
gcacccgaacgcctggtcgtgacggctgcgtga
DBGET
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