Burkholderia ambifaria MC40-6: BamMC406_1982
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Entry
BamMC406_1982 CDS
T00684
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BamMC406_1982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_1982
Enzymes [BR:
bac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BamMC406_1982
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BamMC406_1982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ACB64463
UniProt:
B1YSM7
LinkDB
All DBs
Position
1:complement(2211917..2212780)
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AA seq
287 aa
AA seq
DB search
MATARKAPVRRATQVAARPAARRAPAAKTDATRAVPNGALNGHARPARAKSADAAQPEAA
MAAADAVRKVRASEVAADGADGVARPAYWDKACADLVKRDRILKKLIPKFGPAHLVKRGD
PFVTLARSVVGQQISVPSAQALWACIEDACPKLAPQPVIRLGADKLIACGLSKRKTEYIL
DLAQHFVSGALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGL
IRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDAPDAD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcaagaaaagcgccggtcaggcgcgcgacccaggtcgccgcgcgtccggca
gccaggcgcgcgccggcggcgaagacggacgcgacgcgcgccgtgccgaacggcgcgctc
aacggtcatgcgaggcccgcgcgcgcgaagagcgcggacgcggcgcagccggaggccgcg
atggcggccgccgacgcggtgcgcaaggtgcgagcatccgaggtggcagccgacggcgcc
gatggcgttgcgcgtcctgcctactgggacaaggcgtgcgccgatctcgtcaagcgcgac
cgcatcctgaagaaactgatcccgaagttcggtcccgcgcatctcgtgaagcgcggcgac
ccgttcgtcacgctcgcgcgttcggtcgtcggccagcagatctcggtgccgtccgcgcag
gcgctgtgggcgtgcattgaagatgcgtgtccgaaactcgcgccgcagccggtcatccgg
ctcggcgcggacaagctgatcgcatgcgggctgtcgaagcgcaagacggaatacattctc
gatctcgcgcaacacttcgtgtccggcgcgctgcacgtcgacaaatggacgtcgatggac
gacgaggacgtgatcgctgaactcacgcagatccgcggcatcagtcgctggacggccgag
atgttcctgatcttcaacctgtcgcggccggacgtgctgccgctcgacgatccgggcctg
atccgcgcgatcagcgtcaattacttcagcggggagcccgtcacgcgcagcgaggcgcgc
gaggtggccgccaactgggagccgtggcgtaccgtcgcgacctggtacatgtggcgcagc
ctcgacgcgcccgacgccgattga
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