Burkholderia ambifaria MC40-6: BamMC406_2095
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Entry
BamMC406_2095 CDS
T00684
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_2095
Enzymes [BR:
bac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BamMC406_2095
DNA repair and recombination proteins [BR:
bac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BamMC406_2095
Prokaryotic type
BamMC406_2095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACB64576
UniProt:
B1YT87
LinkDB
All DBs
Position
1:complement(2340798..2342300)
Genome browser
AA seq
500 aa
AA seq
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MSAKSSVAPAIVWFRDDLRVTDQPALTRAVASGRPLVCVYVDDTGDGAGRALGGAARWWL
HGALAALDAALARHGGRLLLLRGDAQREIERVVHDTGAAAVYWNRRYAQPQRDADAALKA
SLKARGLEVESSNGSLLNEPWEVMTGAGTPFQVFTAYWRAVRRDRLVAAPLPEPERIAFH
PWPAAVRERALALNTLALRPHAPDWAGGLRDAWPAPDEAGAHARLDAFVHESLAGYADTR
DRPGESATSRLSPFLRFGNVSPRQVWHAVQGAAQAGGAACAAGAEKFLSELGWREFSHVL
LYHFPALATDNFRAQFDAMPWRDDPAALRAWQRGLTGYPLVDAGMRELWTTGWMHNRARM
VVASFLVKHLLIDWRAGERWFHDTLVDADAANNPANWQWVAGCGADAAPYFRIFNPVTQG
RKFDPQGAYVRRWVPELAGLDAAAIHAPWDASAAQLAAAGVRLGLDYPAPIVDHDGARRR
ALDALATLPKPGAAGQPRAV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagccaagtcgtccgttgctcctgccatcgtatggttccgcgacgacctgcgcgtg
accgaccagcccgcgctgacgcgcgcagtcgcgtcgggccggccgctcgtatgcgtgtat
gtcgacgatacgggcgacggggcggggcgtgcgctcggcggcgcggcgcgctggtggctg
cacggcgcgctcgccgcactcgacgcggcgctcgcgcgtcatggcggacgcctgctgctg
ttgcgcggcgatgcgcagcgcgagatcgagcgcgtcgtgcacgacacgggcgcggcggcc
gtgtactggaaccgccgctatgcgcagccgcaacgcgacgccgatgcggcgttgaaggcg
tcgctgaaggcgcgcggcctcgaggtcgagagcagcaacggcagcctgctgaacgaaccg
tgggaagtgatgacgggcgccggcacgccgttccaggtgttcaccgcctactggcgcgca
gtgcggcgcgatcgcctggtggcggcgccgctgcccgaaccggagcggatcgcgtttcat
ccgtggccggccgccgtgcgcgaacgcgcgctggcgctcaacacactcgcgttgcgcccg
cacgcgccggactgggcaggcggtctgcgcgacgcgtggccggcacccgacgaagccggc
gcgcacgcgcggcttgacgcgttcgtgcacgagtcgctggccggctacgccgacacacgc
gatcgaccgggcgagtccgcgacgagccgtctgtcgccgttcctgcgcttcggcaacgtg
tcaccgcgacaggtatggcatgcggtgcagggtgcggcacaggcgggcggcgcggcgtgc
gcggccggtgcggagaaattcctgagcgagcttggctggcgcgaattcagccacgtgctg
ctgtatcacttcccggcgctcgcaaccgacaacttccgcgcgcagttcgacgcgatgccg
tggcgcgacgatcccgccgcgctgcgcgcatggcagcgcgggctcaccggctatccgctc
gtcgatgcgggaatgcgcgagctgtggacgaccggctggatgcacaaccgcgcgcggatg
gtcgtcgcgtcgttcctcgtcaagcatctgctgatcgactggcgggcgggcgagcgctgg
ttccacgacacgctcgtcgatgcggacgccgcgaacaaccctgcgaactggcaatgggtg
gccggctgcggggccgacgccgcgccgtatttccgcatcttcaatccggtgacgcagggc
cggaagttcgatccgcagggcgcgtacgtgcgccgctgggtgccggaactcgcgggcctc
gacgcggcggcgatccatgcgccatgggacgcgtccgcggcgcaactggcggcggccggc
gtgcggctcgggctcgactatccggcgccgatcgtcgatcacgacggcgcgcgccgtcgt
gcgctcgatgcgctggccacgttgccgaagccgggcgccgccggccagccgcgcgcggtg
taa
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