Burkholderia ambifaria MC40-6: BamMC406_2218
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Entry
BamMC406_2218 CDS
T00684
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bac03019
]
BamMC406_2218
03009 Ribosome biogenesis [BR:
bac03009
]
BamMC406_2218
Messenger RNA biogenesis [BR:
bac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BamMC406_2218
Ribosome biogenesis [BR:
bac03009
]
Prokaryotic type
rRNA processing factors
BamMC406_2218
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF6880
S1
Motif
Other DBs
NCBI-ProteinID:
ACB64697
UniProt:
B1YU57
LinkDB
All DBs
Position
1:2469210..2470679
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AA seq
489 aa
AA seq
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MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPRLAGEPQSGAPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQ
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPPDEKGGYIVRTIAEDATSE
ELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFSNDDTTRIQVDSRETYQ
RLAEFADEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAV
LSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTV
CYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaaatcctgatcaacctcacgccccaggaaacacgggtcgcactcgtccag
caaggcgcggtgcaggaacttcacgtcgagcgcacgctgtcgcgcgggcgggtcggcaac
atctacctcggcaaggtcgtgcgggtgctgcccggcatgcagtcggcgttcattgacatc
ggcctggagcgcgcggcgttcctgcacgtcgcggacatctggcatccgcggctcgccggc
gagccgcagtcgggcgcgccgcaccagccgatcgagaagatcgtgttcgaaggccagacg
ctgatggtccaggtgatcaaggatccgatcggcacgaagggcgcgcgactgtcgacgcag
gtcagcatcgcgggccgcacgctcgtgtatctgccgcaggagccgcacatcggcatctcg
cagaagatcgagagcgaagccgagcgcgaggccgtgcgcgcacgcctgaccgccgtgatc
ccgccggacgagaaaggcggctacatcgtgcgcacgatcgccgaggatgcgacctccgag
gagctggccggcgacgtcacgtacctgcgcaagacctgggcgacgatcgtcgcgcaggcg
cagcggctgccggcgacgagcctgctgtaccaggatctcgacctcgcgcagcgcgtgctg
cgcgatttctcgaacgacgacacgacgcgcatccaggtcgattcgcgcgagacgtaccag
cgcctcgcggaattcgcggacgagttcacgccggcggtgagtccgaagctgcatcactac
accggcgagcggccgctgttcgacctgtacaacatcgagacggagatccagcgcgcgctg
tcgcgccgcgtcgacctgaagtcgggcggctacctgatgatcgaccagaccgaggcgatg
acgacgatcgacgtgaacaccggcggctacgtcggcgcacgcaacttcgacgacacgatc
ttcaagaccaacctcgaggccgcgcacacgatcgcgcggcaattgcggctgcgcaatctc
ggcgggatcatcatcatcgacttcatcgacatggagaacgccgagcatcgcgacgcggtg
ctgtcggagctgaagaaggcactgtcgcgcgaccgcacgcgcgtgacggtcaacggcttc
tcgcagctcgggctcgtcgagatgacgcgcaagcgcacgcgcgaatcgctcgcgcacgtg
ctgtgcgagccgtgcccgacctgccagggcaagggccaggtgaagacgtcgcgcaccgtg
tgctacgacatcctgcgcgagatcctgcgcgagtcgcgccagttcaatccgcgcgaattc
cgcgtgatcgccgcgcagcaggtgatcgacctgttcctcgacgaggagtcccagcatctc
gcgatgctgatcgacttcatcggcaagccggtgtcgctgcaggtcgagtcgaacctcagc
caggagcagtacgatatcgtgctgatgtga
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