Burkholderia ambifaria MC40-6: BamMC406_2805
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Entry
BamMC406_2805 CDS
T00684
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac00550
Peptidoglycan biosynthesis
bac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BamMC406_2805
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bac01002
]
BamMC406_2805
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bac01011
]
BamMC406_2805
Enzymes [BR:
bac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BamMC406_2805
Peptidases and inhibitors [BR:
bac01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
BamMC406_2805
Peptidoglycan biosynthesis and degradation proteins [BR:
bac01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
BamMC406_2805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
ACB65282
UniProt:
B1YNN2
LinkDB
All DBs
Position
1:complement(3109020..3110333)
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AA seq
437 aa
AA seq
DB search
MRLSPQGLKSLASSIAFGTAARNVALGVMLPVALASTIVVAEAKPAAKAKAAHAAPAAAE
QFTGAPATFMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFE
ALDKKKISMEQIITPSEAVRRVGLDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAE
LVGGSEGQFVTLMNAEAQRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYY
GIFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRL
VSVMMGEPKEGERTQDSMKMLNYGYSAFDAVRLFKGGQAMSTPRVYKGKENTVQVGVKSD
QWVTVPRGLGDKVKPEVDVNAPLIAPLAEGQQVGTVKLVADGKTLSEYPVVALQAVPEAG
IFGRIWDSILLMFSKKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtctccccaaggcctcaagtccctcgcttcttccatcgccttcggcaccgcc
gcgcgcaacgtcgcgctgggcgtgatgctgcccgtcgcgctcgcatcgacgatcgtcgtc
gccgaggcgaagccggccgccaaggccaaggccgcgcacgcggcgccggccgccgccgag
cagttcaccggcgcgcccgcgaccttcatgccgggcgcggtgccgccgccgggcgtgaac
gcgcgctcgtgggtgctcgtcgatgcgacgagcaacacggtgctcgcatcgggcaacgcc
gacgaacgcgtcgagcccgcatcgctcacgaagctgatgacggcctacctggtgttcgag
gcgctcgacaagaagaagatctcgatggagcagatcatcacgccgagcgaggcagtgcgc
cgcgtcggcctcgacgagtcgcgcatgttcatcgaggcgaacaagccggtgtcggtgcac
gacctcgtgtacgggatgatcatccagtcgggcaacgacgccgcgatcgcgctggccgaa
ctggtcggcggcagcgaagggcagttcgtcacgctgatgaacgccgaggcgcagcgcctc
ggcatgaagggcacgcacttcgccgacgtgaacggcatgcccgatccaaaccactacacg
acggccggcgacctcgcgaagctgtccgcgcacctgatccgcgattttccgcagtactac
ggcatcttctcggagaaggaattcaagtacaacaacatccgccagggcaaccgcaaccgg
ctgctgtggctggatccgacggtcgacggcctgaagacgggccacacgcaagcggccggc
tactgcctgatcgcatcggccaagcgcgcgatcccgggtgtcgacggccagcgccgtctc
gtgtcggtgatgatgggcgagccgaaggaaggcgagcgcacgcaggacagcatgaagatg
ctgaactacggctatagcgcgttcgacgcggtgcgcctgttcaaggggggccaggcgatg
tcgacgccgcgtgtctacaagggcaaggagaacaccgtgcaggtcggcgtgaagagcgac
cagtgggtgaccgtgccgcgcggcctgggcgacaaggtaaagccggaagtcgacgtcaac
gcgccgctgatcgcgccgctcgcggaaggccagcaggtcggtaccgtgaagctcgtcgcc
gacggcaagacgctgtcggagtacccggtcgtcgcgctgcaggcggtgccggaagcgggt
atcttcgggcgtatctgggactcgatcctgctgatgttcagcaagaagaagtaa
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