Burkholderia ambifaria MC40-6: BamMC406_3363
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Entry
BamMC406_3363 CDS
T00684
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac00260
Glycine, serine and threonine metabolism
bac00460
Cyanoamino acid metabolism
bac00630
Glyoxylate and dicarboxylate metabolism
bac00670
One carbon pool by folate
bac00680
Methane metabolism
bac01100
Metabolic pathways
bac01110
Biosynthesis of secondary metabolites
bac01120
Microbial metabolism in diverse environments
bac01200
Carbon metabolism
bac01230
Biosynthesis of amino acids
bac01240
Biosynthesis of cofactors
bac04981
Folate transport and metabolism
Module
bac_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BamMC406_3363
09102 Energy metabolism
00680 Methane metabolism
BamMC406_3363
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BamMC406_3363
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BamMC406_3363
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BamMC406_3363
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BamMC406_3363
Enzymes [BR:
bac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BamMC406_3363
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ACB65830
UniProt:
B1YYX0
LinkDB
All DBs
Position
2:274832..276079
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AA seq
415 aa
AA seq
DB search
MFNRTTSTVANVDPELWTAIQDENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEQEDIDYDAAEQLAQEHKPKLIVAGASAFAL
KIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKAYQEKVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGPAEAELVGNLIADVLEAPEDAATIERVRGRVAELTQRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcgcactaccagcaccgtcgccaacgtcgatcccgaactctggactgccatt
caggacgagaaccgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacg
agcccggccgtgatggccgcccagggctcgcagctcacgaacaagtacgcggaaggttat
ccgggcaagcgctactacggcggctgtgaatacgtcgacgtggtcgagcagctggcgatc
gaccgtgtgaagcagctgttcggcgcggaagccgcgaacgtgcagccgaactcgggttcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctggcgcacggcggtcacctgacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacggtctgaacgagcaggaagacatcgactacgacgcggccgag
cagctcgcgcaggaacacaagccgaagctgatcgtcgcgggcgcgtcggcgttcgcgctg
aagatcgacttcgagcgtctggcgaagatcgcgaagtcggtgggtgcgtacctgatggtc
gacatggcgcactacgcgggcctgatcgcggcgggcgtgtatccgaacccggtgccgcat
gcggacttcgtgacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagccgatcaactcggcgatcttcccgggcatccagggt
gggccgctgatgcacgtgatcgcggcgaaggccgtggcgttcaaggaagcgctgtcgccg
gaattcaaggcgtaccaggaaaaggtggtcgagaacgcgcgcgtgctggcagaaacgctg
gtcaagcgcgggctgcgaatcgtgtcgggccgcaccgaaagccacgtgatgctggtggac
ctgcgcgcgaagaacatcaccggcaaggcggcggaggcggcgctgggtgctgcgcacatc
acggtgaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggcatc
cgtctgggttcgccggcgatgacgacgcgcggcttcggcccggcggaagccgagctggtc
ggcaacctgattgcggacgtgctggaagcgccggaagatgcggcgacgatcgagcgcgtg
cgcgggcgcgtcgcggagttgacgcagcgtttccccgtctacggctga
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