Burkholderia ambifaria MC40-6: BamMC406_3399
Help
Entry
BamMC406_3399 CDS
T00684
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BamMC406_3399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bac03000
]
BamMC406_3399
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_3399
Enzymes [BR:
bac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BamMC406_3399
Transcription factors [BR:
bac03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BamMC406_3399
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BamMC406_3399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ACB65866
UniProt:
B1YZA1
LinkDB
All DBs
Position
2:complement(320950..322425)
Genome browser
AA seq
491 aa
AA seq
DB search
MVYSRRMRLDPDTCYAALLSRNRRFDGWFFVGVATTGVYCRPLCPVKPPKARNCSYYASA
AAAEKAGFRPCMRCRPELAPGHGLLDLSGNLADAAATLIEDGFLDERSVNALAQRVGVTE
RHLRRIFAAQFGVSPVEFAQTHRLLMAKRLLTDTALPVAVVASTAGFGSVRRLNDLFRQR
YGLNPLRLRKGAGAAGGGDMTFPLPYRPPFAWPELMRFLAQRQIDGVERIDAQGYARVVA
LPNGSGHVTGWLSVTHVPQRFALAVTVSPALTPVVPAVLARVRRLFDLDSRPDVIDAHLG
ALAHGSPGLRVPGAFDGLEIAIRALAGEHLAATHAGPVLTRVAERFGTSVADAAPSLTHA
LPSAAILAVAPPAALEAIGVTREAARAIVSLARVVADGTLALEPMAPLDATLAALRALSG
FDERAVQYVAMRAMAWPNAFPADDAWLAPRVAAERPRIASSASSAPDAARWAPWRAYAAL
HVWRLHGEASR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggtttacagtcgtcgcatgcgcctcgatcccgacacctgctacgcagccctgctttcg
cggaaccgccgcttcgacggctggttcttcgtcggcgtggcgacgaccggtgtgtattgc
cgccccctttgtccggtgaaaccgccgaaggcgcgcaactgcagctattacgcgagcgcc
gccgccgcggagaaagccggctttcggccgtgcatgcgctgccggcccgagctcgcgccc
ggccacgggctgctcgacctgtccggcaatctcgccgacgcggccgccacgctgatcgag
gacggtttcctggacgagcgctcggtcaacgcgctcgcgcagcgcgtcggcgtgaccgag
cgccacctgcgccggatcttcgccgcgcagttcggtgtctcgccggtcgagttcgcgcag
acgcaccggctgctgatggccaagcgcctcctgaccgataccgcgctgccggtggccgtc
gtcgcgtcgaccgccgggtttggcagcgtgcggcgcttgaacgacttgttccggcaacgc
tacggcctcaatccgctgcgcctgcgcaagggcgccggcgcagcgggcggcggcgacatg
acgttcccgctgccgtaccggccgccgttcgcgtggcccgagttgatgcgctttctcgcg
cagcggcagatcgacggcgtcgagcggatcgacgcacagggctatgcgcgcgtcgtcgca
ctgccgaacggcagcggtcatgtgacgggctggctgtccgtcacgcacgtgccgcagcgg
ttcgcgctcgcagtcaccgtgtcgcccgcgctgacgcccgtcgtgccggccgtgctcgcg
cgcgtgcggcggctgttcgatctcgacagccgccccgacgtgatcgacgcgcatctcggc
gcactcgcgcacggctcgcccggtctgcgtgtacccggcgcgttcgacgggctcgagatc
gcgatccgtgcgctcgcgggcgagcatctggccgcgacgcacgcaggcccggtgctgacg
cgggttgccgaacgcttcggtacgtcggtcgccgacgccgcgcccagcctcacgcatgcg
ttgccttcagctgcgatactggcggtcgcgccgccggcggcgctcgaagcaatcggcgtg
acgcgcgaggccgcgcgggcgatcgtgtcactggcccgcgtcgttgcagacggcacgctc
gcgctcgaaccgatggcgccgctcgatgcgacgctcgccgcgttgcgcgcgctgtccggc
ttcgacgaacgcgcggtgcagtacgtcgcgatgcgtgcgatggcctggccgaacgcgttc
cccgccgacgacgcgtggctcgcgccgcgcgtcgccgccgaacgcccgcgcatcgcgtca
tccgcgtcatccgcgcccgatgcggcgcgttgggcgccgtggcgcgcgtatgccgcactg
catgtgtggcgccttcatggagaagcttcgcgatga
DBGET
integrated database retrieval system
