Burkholderia ambifaria MC40-6: BamMC406_3565
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Entry
BamMC406_3565 CDS
T00684
Name
(GenBank) collagen triple helix repeat
Organism
bac
Burkholderia ambifaria MC40-6
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen_mid
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
ACB66032
UniProt:
B1Z013
LinkDB
All DBs
Position
2:complement(499965..501254)
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AA seq
429 aa
AA seq
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MGTTVANGGSQIGGVQVPGTSPTTATSIGNAVTSLGIGVQSLGSGVAAGLGSIGVSPNPL
GPTLTSTTGLLTGAGGAVNNLGNAVTSLGSGPLSPLAPATTLVGDLVNTVGTAVNSTASA
LNTALNSAPVQQLETQLGSVINPITNTLTGGATTPGATQTLGNATLLGAPLSGLLSTLGS
GLGLAGSQVGSATGNPVGTSAGGSVSQLGNTVASAGGLLSSGSSSSGTNPLAPITGLLGT
LTGGLGGGSSSSGSGGTSGTSGTSGTSGGPLAPITGLLGTVTGALGGLGSSGTSGTSGTS
GTGGTSGSGVGGLLAPVTGLVNSLTPLGASLTGTVTTPGGGLTGTLGGALTSGPVGTLTG
SLTSPAGALGALGTASPSGAAGTVTTPSGSSVVTTGLTGSSTGAAGGTNNLLAPVTNLLG
GLLGATPKK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
ttgggcacgacggtcgcgaacggcggtagccagatcggcggcgtgcaggtccccggcacg
agcccgacgacggccaccagcatcggcaacgccgtcacgagcctcggcatcggcgtgcag
tcgctcggcagcggcgtcgcggccggcctcgggtcgatcggcgtgtcgccgaacccgctc
ggcccgacgctcacgtcgaccaccggcctgctgacgggcgccggcggcgcggtcaacaac
ctcggcaacgcggtgacgagcctcggcagcggcccgctgtcgccgctcgcgccggccacg
accctggtcggcgatctggtcaacacggtcggcaccgcggtcaactcgaccgcatcggcg
ctgaacacggcgctgaacagcgcgccggtccagcaactcgagacgcagctcggcagcgtg
atcaacccgatcacgaacacgctgaccggcggcgccacgacgccgggcgccacgcagacg
ctcggcaacgcaaccctcctcggcgccccgctcagcggcctgctgagcacgctcggcagc
ggcctcggcctcgccggctcgcaggtcggcagcgcgaccggcaacccggtcggcacgagc
gccggcggcagcgtgtcccagctcggcaacacggtggcgtcggccggcggcctgctgtca
agcggcagctccagcagcggcaccaacccgctcgcaccgatcaccggtctgctcggtacg
ctgacgggtggcctcggcggcggcagcagctcgagcgggtcgggcggcaccagcggaacg
agcggcacgagtggtaccagcggcggcccgctcgcaccgatcaccggcctgctcggcacg
gtgacgggtgcgctcggcggcctcggttcgagcggaacgagcggaacgagcggaacgagt
ggcaccggcggcaccagcggctcgggtgtcggaggtctgcttgcgccggtcaccggcctc
gtcaactcgctgaccccgctcggcgccagcctgaccggcacggtcacgacgccgggcggc
ggcctgacgggcaccctcggcggtgcgctgacgagcggccccgtcggcacgctgacgggt
tcgctcacgtcgccggccggcgcgttgggcgcgctcggcacggccagcccgagcggcgcg
gccggcacggtgacgacgccgtccggcagcagcgtcgtcacgaccggcctgaccggcagc
tcgaccggtgccgcgggcggcacgaacaacctgctcgcgccggtgacgaacctgctcggc
ggcctgctcggcgccaccccgaagaagtaa
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