Burkholderia ambifaria MC40-6: BamMC406_3769
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Entry
BamMC406_3769 CDS
T00684
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac03030
DNA replication
bac03410
Base excision repair
bac03420
Nucleotide excision repair
bac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BamMC406_3769
03410 Base excision repair
BamMC406_3769
03420 Nucleotide excision repair
BamMC406_3769
03440 Homologous recombination
BamMC406_3769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bac03032
]
BamMC406_3769
03400 DNA repair and recombination proteins [BR:
bac03400
]
BamMC406_3769
Enzymes [BR:
bac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BamMC406_3769
DNA replication proteins [BR:
bac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BamMC406_3769
DNA repair and recombination proteins [BR:
bac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BamMC406_3769
NER (nucleotide excision repair)
GGR (global genome repair) factors
BamMC406_3769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ACB66236
UniProt:
B1Z156
LinkDB
All DBs
Position
2:738546..741299
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVSDRVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLSQYDSLDGVIEHAGEIKGVVGDNLRRALDFLP
LGRTLVTVETACDLAPHLESIEASLRTDGEARDLLRDIFARYGFKTWLREVESAPAEGGG
ADAPEGDPAPVIAADIVREYDTIQTWAQFDAWFAKIDAAALTAFDTETTALDPMIARLVG
LSFSIEPGKAAYLPVAHRGPDMPEQLPIDEVLARLKPWLESADRKKVGQHLKYDAQVLAN
YGIELNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
EQAAAYAAEDADITLQLHQALYPQVAREAGLERVYRDIEMPVSLVLRKMERTGVLIDDAL
LQAQSTEIATRLIELEGQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPATGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFAQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FTRYPGVAQYMEDTRTAAKDKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDRLASRMIMQVHDELVLEVPDDELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatctgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgcgacgacctttatgccgactat
aaggcaaaccgtccgtcgatgccgcccgacctcgcattgcaggtcgagccgatccacggc
gcggtgcgcgcgctcggctggccgctactgatggtcgagggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagccgagcggcacgggatgaacgtgatcgtgtcgaccggc
gacaaggatctcgcgcagctcgtgtccgatcgcgtcacgctcgtcaacacgatgaccaac
gagacgctcgaccgcgacggcgtgatcgcgaagttcggcgtgccgcccgagcggatcatc
gactacctcgcgttgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaagtggctgtcgcaatacgacagcctcgacggcgtgatcgaacac
gcgggcgagatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggccgcacgctcgtgaccgtcgagacggcatgcgatctcgcgccgcatctcgaatcg
atcgaggcgtcgctgaggacggacggcgaagcacgcgacctgctgcgcgacatcttcgcg
cgctacggcttcaagacctggctgcgcgaagtcgagagcgcgcccgccgaaggcggcggc
gccgatgcaccggagggcgaccctgcgccggtgatcgcggcggacatcgtccgcgaatac
gacacgatccagacgtgggcgcaattcgacgcgtggttcgcgaagatcgatgcggccgcg
ctgaccgcgttcgacaccgaaaccaccgcgctcgacccgatgatcgcccgcctcgtcggc
ctgtcgttctcgatcgagccgggcaaggccgcgtatcttccggtcgcgcatcgcggcccc
gacatgcccgagcaactgccgatcgacgaggtgctcgcgcgcctgaagccgtggctcgaa
tcggccgatcgcaagaaggtcggccagcacctgaagtacgacgcgcaggtgctcgcgaac
tacggcatcgagctgaacggcatcgagcacgacacgctgctcgaatcgtacgtgctcgaa
tcccaccgcacgcacgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtacgaggacgtggccggcaagggcgcgaagcagatcggtttcgacgaagtggcgctc
gagcaggccgccgcgtacgcggccgaagatgcggacatcacgttgcagcttcaccaggcg
ctgtatccgcaggtcgcgcgtgaagcgggcctcgagcgcgtgtatcgcgacatcgagatg
ccggtatcgctcgtgctgcgcaagatggagcgcaccggcgtgctgatcgacgacgcgctt
ctgcaggcccaaagcaccgagatcgcgacgcgcctcatcgagctcgagggccaagcgtac
gaactggccggcggcgagttcaatctcggctcgccgaagcagatcgggcagatcttcttc
gagaagctgcaactgccggtcgtgaaaaaaacgccgagcggcgcaccgtcgaccgacgaa
gaagtgttgcagaagctggccgaggattacccgctgccgaagctgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctacaccgacaagctgccgcgcatggtgaatccggcg
acgggccgcgtgcacacgaactatgcgcaggccgtcgcggtcacgggtcggctcgcatcg
aacgatcccaatcttcagaacattccggtgcgcacggccgaaggccggcggatccgcgaa
gcgttcatcgcatcgcccggccaccggatcgtgtcggccgactattcgcagatcgaactg
cggatcatggcgcacatctccggcgacgcgtcgctcttgcgcgcgttcgcgcaaggcgag
gacatccaccgcgcaactgcagccgaagtgttcggcgtgacgccgctggaggtcaactcc
gaccagcgccggatcgcgaaggtgatcaacttcgggctcatctacgggatgagcgcgttc
ggcctcgcgtcgaacctcggcatcacgcgcgatgcggcgaagctctatatcgaccgctac
ttcacgcgctacccgggcgtggcgcagtacatggaagacacgcgcacggcggcgaaggac
aagggctacgtcgaaaccgttttcggccgtcgcctgtggctgccggagatcaacggcggc
aacggcccgcgccgtcaggccgccgagcgcgcggccatcaatgcaccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgcggtggacgactggctcacgcgcgaccgg
ctcgcgtcgcggatgatcatgcaggtgcacgatgaactggtgctcgaggtgcccgacgac
gaactgtcgctcgtgcgcgagaaactgccggaaatgatgtgcggtgtggcgaagctgaag
gtgccgctggtcgccgaagtgggcgccggcgcgaactgggaagaggcacactga
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