Burkholderia ambifaria MC40-6: BamMC406_4159
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Entry
BamMC406_4159 CDS
T00684
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac00100
Steroid biosynthesis
bac00909
Sesquiterpenoid and triterpenoid biosynthesis
bac01100
Metabolic pathways
bac01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
BamMC406_4159
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
BamMC406_4159
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bac01006
]
BamMC406_4159
Enzymes [BR:
bac01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
BamMC406_4159
Prenyltransferases [BR:
bac01006
]
Terpene biosynthesis
Squalene/phytoene synthase
BamMC406_4159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ACB66623
UniProt:
B1Z343
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All DBs
Position
2:1201273..1202337
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AA seq
354 aa
AA seq
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MTTHTDPAYLLGDLLKNVSRSFYLTLRVLPDGMREPVGLAYLLARAADTIADTALVAPER
RAALLTDLRDEIERLGDGAALSRALEDVTRMQTDSHEHMLLASMKPMLALLRAQPDADRA
SIRKVVATLTSGMEFDLRTFPDEQSGQVASLPSRDELDRYTYLVAGCVGEFWTDMTGAHT
RAARGWDFADMREKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLAEHRIGVADLMSP
DASARARGVLVELLRTTLAQYRDACFYTQAIPRRFVRLRLACLWPIMIGLETLALLAGHD
AWLDPARPAKVPRKRIYRIMASSLALVGSNAAIRARINALVDAVNARIAAPASH
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcataccgatcccgcctatctgctcggcgacctgctgaagaacgtttcccgc
tccttttacctgacgctgcgcgtgctgcccgacggcatgcgcgagccggtcggcctggcc
tacctgcttgcgcgcgcggccgacacgatcgccgacacggcgctcgtcgcgcccgagcgt
cgcgcggcgctgctgaccgacctgcgcgacgagatcgagcggctcggcgacggcgcggcg
ctgtcgcgcgcgctcgaggacgtcacgcggatgcagacggattcgcacgaacatatgctg
ctcgcgtcgatgaagccgatgcttgcgttgctgcgcgcgcagccggacgcggaccgcgca
tcgatccgcaaggtcgtcgcgacgctgacgtcggggatggaatttgacctgcgcacattc
cccgacgagcagtcggggcaggtcgcgtcgctgccgagccgtgacgaactcgatcgctac
acgtatctggtcgccggctgcgtcggtgaattctggaccgacatgaccggcgcgcacacg
cgggccgcgcgcggctgggacttcgcggacatgcgcgagaagggcatccgtttcggcaag
gcgctgcagatgaccaacatcctgcgcgactgcgcgaaggacctgcggatcggccgctgc
tacctgccggacgacgtgctggccgagcatcgcatcggcgtcgccgatctgatgtcgccc
gatgcgtcggcccgcgcgcgcggcgtgctggtcgagctgttgcgcacgacgctcgcgcag
tatcgcgacgcgtgcttctatacgcaggcgattccgcgccgcttcgtgcgtctgcggctc
gcgtgcctgtggccgatcatgatcggcctcgaaacgctcgcactgctggccggccacgac
gcgtggctcgatccggcgcggccggcgaaggtgccgcgcaagcggatctaccggatcatg
gcgtcgtcgctcgcgctcgtcggttccaacgcggcgatccgtgcgcgcatcaacgcgctg
gtcgacgcggtgaacgcgcggatcgcggcacccgcgtcgcattga
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