Burkholderia ambifaria MC40-6: BamMC406_4771
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Entry
BamMC406_4771 CDS
T00684
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac00300
Lysine biosynthesis
bac00470
D-Amino acid metabolism
bac01100
Metabolic pathways
bac01110
Biosynthesis of secondary metabolites
bac01120
Microbial metabolism in diverse environments
bac01230
Biosynthesis of amino acids
Module
bac_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BamMC406_4771
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BamMC406_4771
Enzymes [BR:
bac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BamMC406_4771
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ACB67225
UniProt:
B1YYI9
LinkDB
All DBs
Position
2:1907577..1908830
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AA seq
417 aa
AA seq
DB search
MPLDSRQLATLAQQYGTPLWVYDADVIRDRIAQLRQFDVIRYAQKANSNLHILKLMRDER
VCVDAVSLGEIERSLAAGFSPAGGPASGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSL
DMLARVGEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLK
LVGIHMHIGSGVDYGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGEPRVDVGHY
FSQWDAARKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFVLIDAGFND
LMRPSMYGSYHAVSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLAQP
QIGDLLFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLALETFE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgattcccgccagctcgcgacgctcgcccagcaatacggcaccccgctgtgg
gtgtacgatgccgacgtcatacgcgaccgcatcgcccaactgcgtcagttcgacgtgatc
cgctacgcgcagaaagcgaactcgaacctgcatatcctgaagctgatgcgcgatgaacgc
gtgtgcgtcgacgccgtgtcgctcggcgagatcgagcgcagcctcgcggcggggttcagt
ccggcaggcggtcctgcttccggcgatccggaaggcgtcgtgttcacggccgacctgatc
gaccgcccgacgctcgccgccgtgctgaagcacggcgtgaccgtgaacgccggctcgctc
gacatgctggcacgtgtcggcgagcatgcgcccggccatcgcgtgtggctgcgcgtgaat
cccggcttcggccacggccacagcaacaagaccaataccggcggcccccaaagcaagcac
gggatctggatcgacgacgtgccgcgcgcgatcgagatcgtgcgccagtacgggctgaag
ctggtcggcatccacatgcatatcggctcgggcgtcgactatggccacctgtcgcaggtg
tgcgacgcgatggtcgacctcgtcacgtcgctcggccatgacatcgaagcgatttccgct
ggcggcggcctgtcgattccgtatcgcgacggcgagccgcgcgtggacgtcggccactac
ttcagccagtgggatgcggcgcgcaagcggatcgaacggcatctcggccatgcggtgcgc
atcgagatcgagccgggccgcttcctcgtcgccgaggccggtacgctcgtcaccgaagtg
caggccgtgaaccatcggccgaagcacgacttcgtgctgatcgatgcgggcttcaacgac
ctgatgcgtccgtcgatgtacggcagctaccacgcggtgtccgtgcatgcgccggacggc
gcgctgccggccggccggccgctcgtcgacatcgcgatcgcggggcccctgtgcgagtcc
ggcgacgtgttcacgcaggacgcgggcggagtagtcacgcaccgcaagctcgcgcaaccg
cagatcggcgacctgctgttcctgcacgatgcgggcgcatacggcgcatcgatgtcctcg
aactacaacagccggccgctcgcgcctgaagtgctggtcgatcgcggcacgccgcggctg
atccgccgccggcagacgatcggcgaactgctcgcgctcgaaacgttcgagtaa
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