Burkholderia ambifaria MC40-6: BamMC406_5212
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Entry
BamMC406_5212 CDS
T00684
Name
(GenBank) YadA domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bac02000
]
BamMC406_5212
Transporters [BR:
bac02000
]
Other transporters
Pores ion channels [TC:
1
]
BamMC406_5212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
ACB67657
LinkDB
All DBs
Position
2:2411001..2412728
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AA seq
575 aa
AA seq
DB search
MNKHQRGSGNSVQRAPRKSKIALAVTVSAAMVAFAASAPARADYVQNGTSTETSAGCVGN
IAISGSSTYPAAATGCDNVAIGTAAVANSGSSTGAYSETVAIGRMAAATGTFATAVGGNA
VATGDQATAIGTASGAVGTQATAVGNGAIANGATASAFGQGAFAVDQSIAVGQGASATAT
FSTAVGKGSIAAGGTALGFQANAGAGDAVALGVDSSASATGSVAIARATASAVNAVAIGE
GANAADANSVALGSNATTRAYTTVNSVALNGVTYSGFAGTPVGVVSVGSAGAERQIVNVA
AGAISATSTDAVNGSQLFSIANQVSTLTTDLANLTTTVGKISSSVPSGTVMDPTDTAIGT
NTSVTATNGTAVGNGSNVSGDNGTAVGVNSTVTATNGTAIGTNSKVTAANGTAIGTGSNV
SGTDSTAIGTNSRATANNAVALGANSVADRDNTVSIGSPGAERQLTNVADGTAPTDGVNV
RQLNGAINSVREEMSKYRKDANAGTASAIAMANLPQAVLPGEKVVALGGGTYGGQSAMAV
GLSVATAKWLVKGSVTTAVSGHGSFGAGAGVGYRW
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcatcaacgagggtcgggaaattccgtacaacgcgcaccgcgcaagtcgaag
atcgcgcttgccgttacagtcagcgcagccatggtcgcattcgccgcttccgcgcccgcg
cgcgccgactatgtgcagaacggcacgtcgaccgaaacgtcggcgggctgcgtcggcaac
atcgccatttcgggcagcagcacgtatccggccgcggcaaccggctgcgacaacgtcgcg
atcggcacggcggccgtcgcgaattcgggctcgtcgaccggcgcctatagcgaaaccgtc
gcgatcggccgcatggcggccgcgaccggtacgttcgcaacggccgtcggcggaaacgcc
gtggcaaccggcgaccaggcgacagcgatcgggacggcttcgggcgcagtcggcacccag
gccacggcggtcggtaacggcgcgatcgcgaacggcgccacggcgtccgccttcggccag
ggcgcattcgcagtcgaccagtcgatagcggtcggtcaaggcgcgagcgccaccgcgacg
ttctcgaccgccgtgggcaagggcagcattgcagcgggcggtacggccctcggcttccag
gcaaatgccggcgcgggcgatgcggtcgcgctcggcgtcgacagctcggcatcggcgacc
ggcagcgtcgccattgcccgtgcgacggcctccgccgtgaacgcggtcgccatcggcgaa
ggggcgaacgccgccgacgcgaattccgtcgcgctgggctcgaatgcgaccacgcgcgcc
tatacgaccgtcaatagcgtggcgctcaacggcgtgacctacagcggcttcgcgggcacg
ccggtgggcgtggtcagcgtcggcagcgcgggtgccgagcgtcagatcgtgaacgtcgcg
gccggggcaatcagcgcgaccagcacggatgcggtgaacggctcgcagctcttctcgatc
gccaatcaggtgtcgacgctgacgacggacctggccaacctcacgacgaccgtcggcaag
atctcgtccagcgtcccgagcggcacggtgatggacccgacagacaccgcgatcggcacg
aacacgtcggtcaccgcgacgaacggcaccgcggtcggcaacggctcgaacgtctcgggc
gacaacggtacggctgtcggcgtcaactccacggtcaccgcaacgaacggaacggccatc
ggcacgaattcgaaagtcactgcggccaacggaacggcgatcggcacgggctcgaatgtg
tccggcacggactcgaccgccatcggcacgaacagccgggccacggcgaacaacgcggtg
gcgctgggcgcgaattcggttgccgatcgggacaacacggtgtcgatcggttcgcccggt
gccgagcgtcagctgaccaacgtggcggacggcaccgcgccgacggatggcgtgaacgtg
cgccagttgaacggcgcgatcaactccgtgcgcgaggaaatgtcgaagtaccgcaaggac
gccaacgcgggcacggcgagcgcgatcgccatggcgaacctgccgcaagccgtgctgcct
ggcgagaaggtcgtcgcgctcggcggcggcacttacggcggtcaaagcgccatggcggtc
ggcttgtccgtcgcgacggcgaaatggctcgtcaaaggctcggtcacgacggcggtgtcg
ggtcacggctcgttcggcgccggcgcgggcgtcggctaccgctggtaa
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