Burkholderia ambifaria MC40-6: BamMC406_5390
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Entry
BamMC406_5390 CDS
T00684
Name
(GenBank) proprionate catabolism activator, Fis family
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bac03000
]
BamMC406_5390
Transcription factors [BR:
bac03000
]
Prokaryotic type
Helix-turn-helix
Other families
BamMC406_5390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS
PAS_4
AAA_2
AAA
AAA_3
AAA_16
PAS_8
AAA_7
nSTAND3
IstB_IS21
DUF6262
TIP49
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACB67834
UniProt:
B1Z1X9
LinkDB
All DBs
Position
2:2627353..2629335
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AA seq
660 aa
AA seq
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MDLSSTKPVGPADRTVRPRIWAMGISRLRDLFREIAGEFDERADVRIVTRAYEDALSAIA
EAGTARPDVIVAAGSNGGFLKTRAQVPVVVVSPTGFDVMQALARARRDATRIALVSAGET
PPEVRRFVAAYGLDVQFASYQSAQEAEACVLDLHDRGIETIVGPGLVTDLAASAGMGAVF
LYSHASVRKAVETALEVAYATHAEAFRRQRLDNLLQHLRDGVVALDARGHVEAINERLAS
ALGVEPAAAVGRALVDLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTF
QESRAVERLDRALRSQPNTQQFAARYALDDVVGASAPMARVRDLVRRYAKSDATVLVLGE
SGTGKEMIAQSLHALSVRRSYPFVAINCGAFPEALLESELFGYEEGAFTGARRGGKTGLF
EAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV
EAGTFRADLYYRLNILNIGLPPLRERAADIPALAATLLVQAARREPRLAERVREVGDAMR
VFGATQATLARYRWPGNVRELQNVVERIAVELAEEVDEQDPGAPCAALAPDALQAIAPEL
FATPPEAADPDDAQTLQARRRRAEADEIRAVLDACGGDRDRACAMLGISKTTLWRKLSAK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcctcgaccaagcccgtcggcccggctgaccgcacggtgcgcccgcgcatc
tgggcgatgggcatcagccgcctgcgcgacctgtttcgcgagatcgccggcgaattcgac
gaacgcgccgacgtgcgcatcgtcacacgggcctacgaagacgcgctcagcgcaatcgcg
gaagccggcaccgcgcggcccgacgtgatcgtcgcggctggctcgaacggcggcttcctg
aaaacgcgtgcgcaggtgccggtcgtggtcgtgtcgccgaccggcttcgacgtgatgcag
gcgctcgcgcgcgcacggcgcgacgccacccggatcgccctcgtcagcgccggcgagacg
ccgccggaggtgcgccgcttcgtcgccgcctacggcctcgacgtgcagtttgcgtcatat
cagtccgctcaggaagcggaagcctgcgtgctcgatctgcacgaccgcggcatcgagacg
atcgtcggccccggcctcgtcaccgatctcgcggcgagtgccggcatgggcgcggtgttc
ctgtattcgcacgcgtcggtgcgcaaggcggtcgaaacggcgctcgaagtcgcgtacgcg
acgcatgccgaggcgtttcgccggcagcgcctcgacaacctgttgcagcacctgcgcgac
ggggtggtcgcgctcgacgcgcgtggtcacgtcgaggcgatcaacgagcggctcgcgtcg
gcgctcggggtcgaaccggcggcggccgtcggccgcgcgctcgtcgacctgcggcccgag
ctgcgcacgctgcgcggcgaggacggcgacgcgctcgcgacggtgcgcggcgtgcgctac
gtcgtgcatcgcgggccgctcgtcgatcgcggcgtcacgtcgggcagcgtgctgaccttc
caggaatcgcgcgcggtcgaacggctcgaccgcgcgctgcgttcgcagccgaacacgcag
cagttcgcggcgcgctacgcgctcgacgacgtggtcggcgcgtccgcgccgatggcgcgc
gtgcgcgacctcgtgcgccgctacgcgaaatccgacgccaccgtgctcgtgctcggcgaa
agcggcaccggcaaggagatgatcgcgcagagcctgcacgcgctgtccgtgcggcgcagc
tatccgttcgtcgcgatcaactgcggcgcgtttccggaagcgctgctcgagagcgagctg
ttcggttacgaggaaggcgcgttcaccggcgcgcggcgcggcggcaagaccgggctgttc
gaggctgcacaccgcggcacgctgtttctcgacgagatcggcgagatgccgccgtcgctg
caaagccggctgctgcgcgtgctgcaggagcgcgaggtgatccgcctcgggtcgaccgag
ccgatccgcatcgacgtgcgcgtgatcgccgcgacgcaccggccgctgctcgcggccgtc
gaagccggcacgttccgcgcggatctgtattaccggctcaacatcctgaacatcggcctg
ccgccgctgcgcgagcgtgcggccgacattccggcgctcgcggccacgctgctcgtgcag
gccgcgcggcgcgagcctcggctggccgaacgcgtgcgcgaggtcggtgatgcgatgcgc
gtgttcggcgcgacgcaggcgacgctcgcccgctaccgctggcccggcaacgtgcgggaa
ctgcagaacgtggtcgagcggatcgcggtggaactggccgaggaagtcgacgagcaggat
cccggcgccccgtgcgccgcgctcgcgcccgatgcgctgcaggcgatcgcgccggagttg
ttcgcgacaccgcccgaggccgccgatcccgacgacgcgcagacgctgcaagcacgccgc
cgccgcgcggaagccgacgagatccgcgcggtgctcgatgcgtgcggcggcgaccgcgat
cgcgcgtgtgcgatgctgggcatcagcaagacgacgctgtggcggaagctgtcggcgaag
tag
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