Burkholderia ambifaria MC40-6: BamMC406_5547
Help
Entry
BamMC406_5547 CDS
T00684
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bac
Burkholderia ambifaria MC40-6
Pathway
bac00061
Fatty acid biosynthesis
bac00071
Fatty acid degradation
bac01100
Metabolic pathways
bac01212
Fatty acid metabolism
bac02024
Quorum sensing
bac04146
Peroxisome
Module
bac_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BamMC406_5547
00071 Fatty acid degradation
BamMC406_5547
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BamMC406_5547
09145 Cellular community - prokaryotes
02024 Quorum sensing
BamMC406_5547
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bac01004
]
BamMC406_5547
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bac04147
]
BamMC406_5547
Enzymes [BR:
bac01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BamMC406_5547
Lipid biosynthesis proteins [BR:
bac01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BamMC406_5547
Exosome [BR:
bac04147
]
Exosomal proteins
Exosomal proteins of breast milk
BamMC406_5547
Exosomal proteins of breast cancer cells
BamMC406_5547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
OYE-like_second_a-b
Motif
Other DBs
NCBI-ProteinID:
ACB67990
UniProt:
B1Z5E4
LinkDB
All DBs
Position
3:complement(42516..44150)
Genome browser
AA seq
544 aa
AA seq
DB search
MTKRHWIGSYGSIPAEIDADRHPSVTALLDDPMRRFAERPAFHAFGRTLTYADVDRLSTA
LAAYLQQVAGVRKGDRVAVMLPNVLAFPVVFVALARIGAIQVNVNPLYTAHELEHQLNDA
GVEVAVVCGGSMGTFADVVGRTRIRTVLSVGRGDLGVVDAPAGACDALPPGSIALAHALA
AGESLAVEPVALGGDDLLLLQYTGGTTGLSKGAALSHRNLVANIEQFGAIVPGARQPGEE
VVVTAIPLYHIFALTVNFLSYFAIGAENWLVANPRDMDGFIDVLKAARPSVFVGVNTLYA
GLAAHPRLNEVDWSRLKLSAGGGAAVIDVISARWKAVTGNFIREGYGLSETSPVVTFNPQ
SIDAFTGTTGLPLPSTDVKLLDDQDREVAIGEAGEICVKGPQVMGGYWRKPDANAAAFTT
DGYFRTGDIGVFDAAGFLKIVDRKKDMIIVSGFNVYPNEVEAVATALPGVAECACIGVPD
ERTGEAVKLFVVPAPDAALTDAQIVAHCRANLAAYKVPKLIRLVDRLPKSTVGKILRREL
SRAD
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagacactggatcggctcgtacggctcgatccccgccgagatcgacgccgat
cgccatccttccgtaaccgcgttgctggacgacccgatgcgccgcttcgcggagcgcccc
gcgttccacgcgttcggccgcacgctcacctatgccgacgtcgaccgcctgtcgaccgcg
ctggccgcgtacctgcagcaggtcgcgggcgtacgcaagggcgaccgcgtggccgtgatg
ctgcccaacgtgctcgcctttccggtggtgttcgtcgcgctcgcgcggatcggcgcgatc
caggtcaacgtgaatccgctctacaccgcgcatgagctcgaacatcagctcaacgacgcg
ggtgtcgaagtggccgtggtatgcggtggatcgatgggcacgttcgccgatgtggtcggc
aggacgcgcatacgaaccgtgctgagcgtgggccgcggcgatctcggcgtcgtcgatgcg
ccggccggcgcgtgcgatgcgctgccgcccggctcgatcgcactcgcgcacgcgctggcc
gccggcgaatcgctcgcggtcgagccggtcgcgctcggcggcgacgatctgctgctgctg
cagtacacgggcggcacgaccgggctgtcgaagggcgccgcgctgtcgcatcgcaacctg
gtcgcgaacatcgagcagttcggcgcgatcgtgccgggcgcgcggcagccgggcgaggag
gtcgtcgtcacggcgatcccgctgtatcacatcttcgcgctgacggtgaacttcctgtcc
tacttcgcgatcggcgcggagaactggctcgtcgcgaatccgcgcgacatggacggcttc
atcgacgtgctgaaggccgcgcggccgtcggtgttcgtcggcgtcaatacgctgtatgcg
gggctcgccgcccatccgcggctgaacgaggtcgactggtcgcggctgaagctgtcggcc
ggcggcggcgcggcggtgatcgacgtgatttccgctcgctggaaggcggtgacgggcaac
ttcatccgcgaagggtacgggctgtcggaaacgtcgccggtggtcacgttcaacccgcag
tcgatcgacgcgttcacgggcacgacgggcctgccgctgccgtcgaccgacgtgaagctg
ctggacgaccaggatcgcgaggtggcgatcggcgaagcgggcgaaatctgcgtgaagggg
ccgcaggtgatgggcggctactggcgcaagccggacgcgaacgcggccgcgttcaccacg
gacggctacttccgcaccggcgacatcggcgtgttcgacgcggccggcttcctgaagatc
gtcgaccgcaagaaggacatgatcatcgtgtcgggcttcaacgtgtacccgaacgaggtg
gaagcggttgcgaccgcgttgccgggcgtcgccgaatgcgcgtgcatcggcgtgccggac
gagcgcaccggcgaggccgtcaagctgttcgtggtgcccgcgcccgacgcggccctgacc
gacgcgcagatcgtcgcgcattgccgcgcgaacctcgccgcgtacaaggtgccgaagctg
atccgcctggtcgaccggctcccgaagtcgacggtcggcaagatcctgcgccgggaactc
agccgcgcggactga
DBGET
integrated database retrieval system
