Burkholderia ambifaria MC40-6: BamMC406_5930
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Entry
BamMC406_5930 CDS
T00684
Name
(GenBank) YadA domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bac02000
]
BamMC406_5930
Transporters [BR:
bac02000
]
Other transporters
Pores ion channels [TC:
1
]
BamMC406_5930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
ACB68367
UniProt:
B1Z3Q4
LinkDB
All DBs
Position
3:474539..478843
Genome browser
AA seq
1434 aa
AA seq
DB search
MNKSFKSIWNEALGAWVAASELDRARGKRVASSRSASAHAADACAVACIATKPALSPRRL
VVMTAAAYLGLFQAGAHAQYSAGGGSATGGASSTAIGNGSVASQVNATSYGNLSTAAGQS
STAIGPGARAMADGGTAIGINSQATGFNSAALGVQAISSGAFSVAIGNLSSATQSGAVAM
GSGAAATGVSAVGLGNNALASGQYAAALGLGASAVGAQSVSLGYASNATNTGSVALGNQS
TSSGAAGVAVGSGTLASGNSGVAMGVNSGAKGTASIAIGWGGTAGVPGSGTQSLGSNSMA
MGSNTTASANNAIAFGVNTVGSGVSSIAMGVQSSATQQFGLAFGNLALATGVGGTALGAS
ATASQTNAFAAGTSSNATGVNAIALGTQATSAATNAVALGAASSATDDGSVAIGASSSAG
NNTGTPTYRATAVGAASQATGQFSSAFGASAAATGTAAVAIGDAANASATNAIAMGSSAA
AASGNAVAIGTGATATGGAAVSIGAGNTAVGNGAVAIGDPSYASGTGAFTGGANNIANSD
GTASATVSNQANGAVAIGNNNKAIGQGSVALGNASTAGAAGMAGNVALGDGATAATSAGD
VALGSGSVTAAPNPTASATIGGVTYSFKGINPTSVVSVGNVGTERQITNVAAGRISSTST
DAINGSQLDATNQAVTSLSTSTLSSITSLSTSTSTGIGSLSTGLSSTNSSVTSLSTSTST
GLSSANSAITSLSTSTSTGISSLSTGLSSTNSAVTSLSTSTSTGIGSLSTGLSATNSAIT
SLSTSTSTGLSSLSTGLSSTNSTVTSLSTSTSTGIGSLSTGLSATNSNLTSLSTATSTGI
GSLSTSLSSIVNNNTNLGNSTAGAIGGGSTYDPTTGTISAPSYVTYNSDGSTTINNNVGS
VVDNINAHGIKYFHANSTAPDSQAIGVDSVAIGPNAISLVNGSIALGSGSVADRPTAPSS
GIIRNGTAAIPFNTTDQTLLGAVSVGDTTNRTYRQITNVADGTGQQDAVTVRQLTGALQS
FAVTGQKYFHANSTAGDSLAVGAESVAVGPTTVVNGDNGVGIGNGAIVDQTAPGGVAIGQ
AASSAQADAIALGSGASALGAQSVAQGANASAVSVGSVALGSGAHSTATDALALGAGASA
TLANSVALGAGSLTTVGALTNYVAYGLSSPQSSAGEINIGNRQITGLAAGKNGTDAVNVS
QLDSVANQLTTLITQRTTNLGGQYTTNPPGGNVPPGASGSNSSAGGSGAVASGSNSTAVG
NSSTASGNGSTAIGVGSIASGNNSTAVGAGSNDGGRSNVVAVGSADSPRQVVNVAAGTQG
TDAVNVNQLNAVSNQFTQSLNTVNNQISQMQQQIQQTDSMAREGIAATAALASIPHMDRD
SNFAMGVGTATFQGQKAMAVGVQARLTENLKATLNGGFAGSQRVVGAGVLYQWK
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcgttcaagtcgatctggaacgaagcactgggggcgtgggttgcggcgtcc
gagctcgatcgcgcgcgcggcaagcgggttgcgtcgtcgcgaagcgcgtccgcgcatgcg
gcagacgcgtgcgccgtcgcgtgcatcgcgacgaagccggcgctctcgcccaggcggctc
gtcgtgatgacggcggccgcgtatctcgggctgtttcaggccggtgcgcatgcgcaatat
tcggcaggtggtggctccgcgaccggcggcgccagttcgaccgcgatcggcaacgggtcc
gtagcgtcgcaagtgaatgctacctcctacggcaacctgtcgacggcggcgggccagtcg
tccacggcgattggccccggcgcgcgtgcgatggccgatggtgggacggccatcggcatc
aactcgcaggcgaccggcttcaacagcgcggcgctgggcgtgcaggcgatcagcagcggc
gctttctcggttgccatcggcaatctctcgagtgcgacccaaagcggcgcggtggcgatg
ggcagcggcgcggccgcgaccggcgtttcggctgtcgggctcggcaacaatgcgttggcg
tcgggccagtatgcggccgcgctcggtctcggggcgagcgcggtgggggctcaaagcgtc
tcgctcggctatgcgtcgaatgcaaccaatacgggctcggtcgcgctcggcaaccagtcg
acgagttcgggcgcggccggcgttgcggtgggcagtggcacgctggcttccggaaattcg
ggtgtggcgatgggcgtcaacagtggcgcgaaaggtaccgcgtcgatcgcgatcggctgg
ggcggcacagccggcgtgcccggttcgggcacgcaatcgctcggctccaattcgatggcg
atgggctcgaatacgacggccagcgccaacaatgcgattgcgttcggtgtgaacacggtt
ggatcgggcgtcagttcgatcgcgatgggcgttcaatcgagcgcgacgcagcagttcggc
cttgcgttcggcaatctcgcgctcgccaccggcgttggggggacggccttgggcgccagc
gcgacggcatcgcagaccaacgccttcgcagcgggaacctcgagcaacgcgaccggtgtc
aacgcgatcgccctgggcacgcaggcaacgtccgcagccacgaacgcggtcgccttgggg
gctgcgtcctcggcgaccgacgacggcagtgttgccatcggcgcttcgtcgagcgccggc
aacaacaccggcacgccgacctatcgcgctacggcggtcggtgccgccagccaggcgaca
ggtcagttctcgtccgcattcggcgcgagcgcggccgcgaccggcactgccgccgtggcg
atcggcgatgccgccaatgcgtcggccaccaatgcgatcgccatgggcagcagcgctgcc
gccgcttccggcaacgccgtggcgatcggcacgggcgccaccgccaccggcggcgcggcg
gtttccatcggcgcgggtaacaccgccgtcggcaatggcgcggtagcgattggcgatccg
agttacgccagcggcaccggtgcgttcacgggtggcgcgaacaacattgccaacagcgac
ggcaccgcatccgcgacggtctccaatcaggccaatggcgcggtggcgatcggcaacaac
aacaaggcgatcggtcagggcagcgtcgcgttgggcaacgcttcgacggcgggcgcggcg
ggaatggccggcaacgtcgcgttgggtgacggcgcgacggcggcgaccagcgctggcgac
gtcgcgctcggctcggggtcggtgacggccgcgccgaacccgaccgcgtcggcgacgatc
ggcggcgtcacgtacagcttcaagggtatcaatccgacgagcgtcgtcagcgtgggcaac
gttggcaccgagcgtcagatcaccaacgtcgcggccgggcgcatcagttcgacgagcacg
gacgcgatcaacggttcgcagctcgatgcgacgaaccaggcggtgacatcgctgtcgacg
tcgacgttgtccagcatcacgtcgttatcgacttcgacgtcgaccgggatcggttcgttg
tccacgggcctcagctcgaccaacagttcggtgacgtcgctgtcgacgtccacgtcgacg
gggctgtcgtcggccaatagcgcgatcacgtcgctgtcgacttcgacgtcgaccggcatc
agctcgttgtccacgggcttgagctcgaccaacagcgcggtgacgtcgttgtccacgtcg
acgtccacgggaatcggttcgctgtccaccggcctgagcgcaacgaacagcgcgatcacg
tcgctgtcgacgtcgacctcgaccggcctcagctcgctgtccaccggcctgagctcgacg
aacagcacggtcacgtcgctgtcgacttcgacgtccaccggcatcggctcgctgtccacc
ggcctgagcgcgacgaacagcaacctcacctcgctgtcgaccgccacgtcgacgggcatc
ggttcgctgtcgacgagcctcagctcgatcgtgaacaacaacaccaatctcggcaacagc
acggccggcgcgatcggcggcggctcgacctacgacccgacgaccggcacgatttcggcg
ccgtcgtacgtgacgtacaacagcgacggctcgaccacgatcaacaacaacgtcggttcc
gtggtcgacaacatcaacgcgcacggcatcaagtatttccacgcgaactcgactgcgccg
gacagccaggcgatcggcgtcgacagcgtcgcgatcggcccgaacgcgatctcgctcgtg
aacggcagcatcgcgctcggttccggttcggtcgccgatcggccgacggcgccgtcgtcg
ggcatcatccgcaacggcaccgcggcgatcccgttcaacacgacggaccagacgctgctc
ggcgcggtgtcggtgggcgacacgacgaaccgcacgtatcgccagatcaccaacgtcgcg
gacggcaccgggcagcaggacgctgtgacggtacggcagctgaccggtgcattgcagtcg
ttcgcggtcacgggccagaagtacttccacgcgaattcgacggccggcgactcgctcgcg
gtcggcgcggaatcggtcgcggtcgggccgacgacggtggtgaacggcgacaacggcgtg
ggcatcggcaacggcgcgatcgtcgaccagaccgcacccggcggcgtcgcgatcgggcag
gccgcgagttccgcgcaggccgatgcgatcgcactcggcagcggtgcgtcggccctcggc
gcgcagtcggtcgcgcagggtgccaatgcgtcggcggtcagcgtgggcagcgtcgcgctc
ggctcgggtgcgcacagcaccgccaccgatgcgctcgcgctcggcgccggtgcgtcggcg
acgctcgcgaacagcgtcgcgctgggcgccggttcgctgaccacggtcggcgcgctgacg
aactacgtcgcgtacggcctgagcagcccgcagtcgtcggccggtgaaatcaatatcggc
aaccggcagatcacgggtctcgccgccggcaagaacggcacggacgcggtgaacgtgtcg
cagctcgactcggtcgcgaaccagttgacgacgctgattacgcaacgcacgaccaatctc
ggcgggcagtacacgacgaacccgccgggcggcaacgtgccgccgggggcgagcggttcg
aattcgtcggcgggcggttcgggggcggtcgcatcgggctcgaacagcacggcggtcggc
aacagttcgacggcgtccggcaacggctcgacggcgatcggcgtcggctcgatcgcatcg
ggcaacaactcgacggcggtcggcgcgggcagcaacgacggcggccgctcgaacgtcgtc
gcggtcggctccgcggattcgccgcgccaggtcgtcaacgtcgcggcgggcacgcagggc
accgatgcggtgaacgtgaaccagctgaatgcggtctcgaaccagttcacgcagtcgctg
aacacggtcaacaaccagatctcgcagatgcagcagcagatccagcagaccgattcgatg
gcgcgtgaggggattgccgcgacggccgcgttggcgtcgattccgcacatggaccgcgac
tcgaacttcgcgatgggcgtcggtaccgcgacgttccagggtcagaaggccatggccgtc
ggcgtgcaggcgcgtctcacggagaacctgaaggcgacgctgaacggcggcttcgcaggc
agccagcgcgtcgtcggcgcgggcgtgctgtatcagtggaagtaa
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integrated database retrieval system
