Burkholderia ambifaria MC40-6: BamMC406_6018
Help
Entry
BamMC406_6018 CDS
T00684
Name
(GenBank) transcriptional regulator, LysR family
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bac03000
]
BamMC406_6018
Transcription factors [BR:
bac03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BamMC406_6018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_50
MarR_2
HTH_29
I-HmuI_NUMOD-like
HTH_24
HTH_23
HVO_A0114
MarR
Cro
Kdo
ANKA
Motif
Other DBs
NCBI-ProteinID:
ACB68454
LinkDB
All DBs
Position
3:complement(574615..575577)
Genome browser
AA seq
320 aa
AA seq
DB search
MSTIKLHQLQALVASAEAGSIRGAARTLGLSQAAVTRALRELEASERLPLLVRAPEGIGF
TEYGKTLLTHAKLVLKQLEHAQSDLERMRGRVEGRLSVGVTPWLTMTFLAETVLRFRERM
PDVRLELYEALMAVAQPLLRDGSMDFALGHVQPGSSAQEFAFEPLLRYDTSVMVRAGHPR
ERAKSVHDLLDCDWVLNSSPDGQAALVDYLFTRHGAQIDERRIVRAQSVAMLQTMLEQAG
MCTWCPTILAAVPPFGERMRVLSLKETFEPSELGIVTRRSSTLSDAARCFIDCLLQTIRR
HARSARKEDLSLFRTLTLLI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgatcaagctgcatcagttgcaggcgctcgtcgcgagcgcggaggccggcagc
atccgcggcgcggcgcgcacgctcgggctgtcgcaggcggccgtcacgcgcgcgctgcgc
gagctggaggccagcgagcgcctgccgttgctcgtgcgcgcgccggaaggcatcggcttc
accgagtacgggaagaccctgctcacgcacgctaagctcgtgctcaagcaactggagcac
gcgcagagcgatctcgagcggatgcgcgggcgcgtcgaggggcggctgagcgtcggcgtc
acgccgtggctgacgatgacgttcctcgcggaaaccgtgctgcggtttcgcgaacggatg
cccgacgtgcgcctcgagctgtacgaagcgctgatggccgtcgcgcaaccgctgctgcgc
gacggcagcatggatttcgcgctcggccacgtgcagcccggcagcagcgcgcaggaattt
gcattcgagccactgctgcgctacgacacgtcggtgatggtgcgcgccggccatccgcgc
gaacgcgcgaagtcggtgcacgacctgctcgattgcgactgggtgctgaattcgtcgccc
gacggtcaggccgcgctcgtcgactatctgttcacgcggcacggcgcgcagatcgacgaa
cggcgcatcgtgcgcgcgcagtcggtcgcgatgctgcagacgatgctcgaacaggccggc
atgtgcacgtggtgcccgaccatcctcgcggccgtgccgccgttcggcgagcggatgcgc
gtgctgtcgctgaaggaaaccttcgagccgagcgaactcggcatcgtcacgcgccgcagc
agcacgctgagcgacgccgcgcgctgcttcatcgactgcctgctgcagacgatccggcgg
catgcgcgctcggcgcggaaggaagatctctcgctgttccgcacgctgacgctgttgatc
tga
DBGET
integrated database retrieval system
