Burkholderia ambifaria MC40-6: BamMC406_6171
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Entry
BamMC406_6171 CDS
T00684
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
bac
Burkholderia ambifaria MC40-6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
ESPR
Motif
Other DBs
NCBI-ProteinID:
ACB68605
UniProt:
B1Z4E2
LinkDB
All DBs
Position
3:754602..758978
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AA seq
1458 aa
AA seq
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MNRVYRLVWNRTLRAPQVVSERTRASHGGIDASHGATPARRCASIVSIGVSLGLAGTALP
GWAATCTASTIANCSAPGGNGIPDRSGNGGSGNGGGGGSSALGGGTITIQVPGGPTSGGT
GGTGATNDSGQGGPGGAPDVVIAGDAVVNGSAQGGAGQGFDGLNFAGGGGGGGAGVYSTG
TSVTVNDGVTVQGGTGGNGGAGTSGPASNGGGGGGGGGALVIVTPAADVTNHGTLIGGNG
GNGGGGGNPGGGGGGGDGLLTVGPGSQVTNLGTIVGGVGGAAGGGGSTAGASGAGVNLAG
GFTVLSNVGTITGGAGNGGAAGAGVIANGGDVIVNGGTIAGGLFADGVTRAAAIRFNGAN
DTLQLVGGSNIIGDLDVAAGASATITAGTPGLALSNNITLGDAASRVTLNSNTTDLAVSG
VISGTGNVAVSGSHTITLTGDSTYTGGTTISAGTLQIGNGGATGSVVGDIVNNGTLAFNR
SDTVSYGGTISGTGSLVQAGTGTLAIAGAAGYAGSTTVNAGTLALIGAGSIAASSGLVNN
GTFDISGTTSGATINAITGTGTVALGDRTLTLANAAGTFAGTIGGTGAVTVGGGTQTLSG
VNTYTGVTTVNAGTLALTGAGSIAASSGVVNNGTFDISGTTSGATINAITGTGAVALGGR
TLTLANASGTFAGTIDGTGAVTIGGGTQTLSGANTYTGVTTVNAGTLALTGAGSIATSSG
VINNGTFDISGTTSGATINALTGTGTVALGDRTLTLANAAGTFSGAIGGTGGLTVAGGTQ
TLSVANGYTGATSISAGTLALSGAGSIAASSGVINNGTLDISGTTSGATVNALTGTGTVA
LGGRTLTLANAAGTFSGAIGGTGGLTVAGGTQTLSGVNTYTGATMVHAGTLALSGAGRLA
SSTSVTLAGATAALDLSAVGNQTVAHLSGVAGSRVVLGGSALTLSDDSSQTFGGSLGGTG
GLVKQGAGTLTLNGVSSAFSGTTTVAGGTLAVGDAANAGAVLGGNVLVSSLGTLRGHGTV
SGDVSSSGVVAPGGSIGTLSVGGNYTQAAGGTLSIEVSPTEASQLRVSGTATLNGSLAVL
FDPGTYTARRYTVLSAANGVTGRFANVGTTTAGANLGALQSSVDYGANGVDLLLADATGP
TPAGPTVIAPTKTSIYTALGTAALLQAQGASSTLLGRLADPRDNAAGSRNVWAVASGSST
KVGGTGGAPGFLTHAYGFLAGAGGRLGDATIGAAGGYTHTTLGEDTTGASGAIDTLRVAL
YGAQPVGAVNLSATVGYGLDFLSQKRPFGSAGTAEGDHLGHEFTAATQASLPMDAGGLRI
APHIGLRYAYVRGSGFGESGANGQNLHVGPDSARSLQPYVGVSLDKAFGDALRPVNVQLR
LAYAHEVLGAGRVVQVQSQDGTVFAAPGTDLPRSFLTTGAGVTLQAAKATTVSLGLDATI
DTSHVSAQSAYVRVNHRF
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggtctatcggctggtctggaaccgcaccttgcgcgccccgcaagtggtatcc
gaacgcacacgcgcgtcgcacggcgggatcgacgccagccatggcgccacgcctgcgcgc
cgctgcgcgtccatcgtttccatcggcgtgtcgctcggtctggccggcacggccctccca
ggctgggccgccacgtgcactgccagcaccatcgcgaattgcagcgcccccggcggcaac
ggtatcccggaccgaagcggcaatggcggcagcggtaatggcggtggcggtggttcctct
gcgttgggcggaggaaccatcacgattcaggttcctggcgggcccacgtcgggtgggacc
ggcggtaccggtgccacgaacgacagtggccaaggcggccccggaggggcgcccgacgtg
gtgatcgccggcgatgccgtggtcaacgggagcgctcagggaggcgcaggccagggcttc
gatggactcaatttcgcgggcggcggcggcggcggtggcgcgggcgtgtattcgaccggc
accagcgtgaccgtcaacgacggcgtgacggtgcagggcggcacaggcggaaatggcggc
gcgggcacatcggggcctgcctccaacggcggcgggggtggaggcgggggcggtgcgctg
gtgatcgtgacgcctgcggccgacgtgacgaaccacggcacgctcattggcggaaatggc
ggcaacgggggaggtggcggaaacccgggaggcggcggcggtggcggcgacgggctgctg
accgtgggaccgggttcgcaggtgaccaaccttgggacgatcgtcggtggtgtgggcggt
gccgctggcggtggcggaagcacggccggcgccagcggcgcgggcgtcaacctggctggc
gggttcaccgtgctgtccaacgtcggcacgatcacgggcggtgccggcaacggaggggcc
gcgggagcgggtgtcatcgccaatggcggcgatgtcatcgtcaacggcggcacgattgcg
ggcggcttgttcgcggacggcgtgacgcgcgcggcagccatccggttcaacggagcgaac
gatacgctgcagttggtcggcgggtccaacatcatcggtgacctcgatgtggcggcgggt
gcgtcggccaccatcaccgcgggcacgccggggcttgcgctgtccaacaacatcacgctc
ggcgatgccgcatcccgcgtgaccttgaactcaaacacgacggatctcgcggtatcaggc
gtcatatcggggacgggcaacgtggccgtgagcggcagccacacgatcacgctgacgggt
gacagcacctataccggcggcaccacgatcagcgccggcacgctgcagatcggcaatggc
ggagccaccggctccgtcgtcggcgacatcgtcaacaacggcacgctggctttcaaccgc
agcgacacggtgtcgtatggcggcaccatcagcgggacgggcagcctcgtgcaggcgggt
accggcacgctggcgatagccggcgccgccggctatgcggggagcaccaccgtcaacgcg
ggcacgctcgcgctgatcggcgcgggcagcattgccgcttccagcgggctcgtcaacaac
ggcacgttcgatatctcggggactacctccggggccacgatcaatgcgatcactggcacg
ggcacggtcgcgctgggcgatcggacactgacgctggccaatgcggccggcacgttcgcc
ggaaccatcggcggtacgggtgcggtgaccgtcggcggcggtacgcaaacgctgtcgggg
gtgaacacctacacgggcgtcactaccgtcaatgccggcacgctggcgttgactggcgcc
ggcagcatcgccgcttccagcggggtcgtcaacaacggtacgttcgatatctcggggact
acctccggggccacgatcaatgcgatcactggcacgggcgcggttgcgctgggcggccgg
acattgacgctggctaatgcatccggcacgtttgccggaaccatcgacggtacgggcgca
gtgaccataggcggcggtacgcaaacgctgtccggggcgaacacctacacgggcgtcacc
accgtcaatgccggcacgttggcattgaccggcgccggcagcattgccacttccagcggc
gtcatcaacaacggcacgttcgatatctccgggaccacctcaggggccacgatcaatgcg
ctcactggcacgggcacggttgcgcttggcgaccggacactgacgctggccaatgcagcc
ggcacgttcagtggcgccattggcggcacgggcgggctcaccgtggcgggcggcacgcag
acgctgtcggttgccaacggctataccggcgcaacgtcgatcagcgccggcacgctcgcg
ctgtcaggcgccggcagcattgccgcttccagcggggtcatcaacaacggcacgctcgat
atctcggggaccacctccggcgcaacggtcaacgcactgaccggcacgggcacggttgcg
ctgggcggccgcacgctgacgctggccaatgcggccggcacgttcagtggcgccatcggc
ggtaccggcgggcttaccgtggcgggtggcacgcaaacgctgtccggtgtgaacacctat
accggggcgacgatggtccacgcgggcacgctggcgttgtcgggtgccggccggctcgcc
tcttccacgtcggtcacgctcgccggcgcaacggccgcgctcgacctgtccgccgtcggc
aaccaaacggtcgcgcatctgtccggcgtggcgggcagccgggtggtgctgggtggcagt
gcgctcacgctgtccgacgactcgtcgcaaacattcggcggcagcctcggcggcaccggc
ggtttggtcaaacaaggcgcgggcacgctgacgctgaacggtgtcagcagcgcgttctcc
gggacgacgacggtggctggcggcacgttggccgtgggcgacgcggccaatgccggtgcg
gtgttgggtggcaatgtcctggtgagttcgcttggcacgttgcgcggccatggcacggta
tcgggcgacgtcagcagcagtggcgtggtcgcgccgggcggctccatcggaacgctgtcc
gtgggcggcaactatacccaggcggcgggcggcaccctgtcgatcgaggtcagcccgacg
gaggcatcgcaacttcgcgtaagcggtaccgcgacgctcaacggctcattggccgttctg
ttcgatcccggcacctataccgcacgccgctacaccgtgctgagcgccgccaacggcgtg
acgggccgcttcgcgaacgtcggcaccaccacggccggcgcgaatctcggcgcgttgcag
tcatcggtggactacggtgccaatggagtcgacttgctgctcgccgatgccaccgggccc
acgccggccggcccgaccgtaattgcgccgaccaagacctccatctacacggcgctcggc
acggcagcattgcttcaggcgcagggcgcgagttcgacgctgctcggccgtctggcggac
ccgcgggacaacgcggcaggttcccgcaacgtgtgggccgttgccagcggttccagcacc
aaggtgggcggcacgggcggcgcgcccggctttcttacccacgcctatgggttcctggca
ggcgcgggaggacggctcggcgatgccacgatcggtgcggccggcggctacacgcacacc
acgctgggtgaagacacgacaggtgcatcgggtgccatcgatacgctgcgtgtcgccctg
tatggcgcgcagcccgtgggtgccgtcaacctgtcggccacggtcgggtatgggctggat
ttcctgtcgcagaagcggccgttcggcagcgcgggtaccgcagaaggcgatcatctcggc
cacgagttcaccgccgcgacgcaggccagcctgcccatggacgccggcggccttcggatc
gcgccccacatcgggctccggtatgcgtacgtgcgcggcagcggcttcggcgagagcggc
gccaacggccagaacctgcacgtcggccccgacagcgcgaggagcctccagccttacgtg
ggtgtctcgctcgacaaggccttcggcgatgccctgcgccccgtcaacgtacagcttcgc
ctggcctatgcgcacgaggtactgggagccggccgcgtcgtccaggtgcagagccaggac
gggaccgtgttcgccgcgccaggcaccgatctgccgcgttcattcctgaccacgggcgcc
ggcgtcacccttcaggccgccaaggcgaccacggtatcgctcgggctggatgcgacgatt
gacacgagccatgtgtcggcgcagtcggcgtatgtgcgagtcaatcacaggttctga
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