Bacillus sp. S3: FAY30_01425
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Entry
FAY30_01425 CDS
T08283
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
baca
Bacillus sp. S3
Pathway
baca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAY30_01425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baca03019
]
FAY30_01425
03009 Ribosome biogenesis [BR:
baca03009
]
FAY30_01425
Enzymes [BR:
baca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FAY30_01425
Messenger RNA biogenesis [BR:
baca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FAY30_01425
Ribosome biogenesis [BR:
baca03009
]
Prokaryotic type
rRNA helicases
FAY30_01425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF7350
UvrA_inter
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCJ40682
LinkDB
All DBs
Position
287565..289049
Genome browser
AA seq
494 aa
AA seq
DB search
MTKFQDLGISQATLKAVLKMGFEEATPIQAETIPLSLENKDLIGQAQTGTGKTAAFGIPL
VEKVDMKLDAIQGIIIAPTRELAIQVSEELYKIGAGKRVRVLPIYGGQDISRQIRSLKKA
PHIIVGTPGRVLDHINRKTMRLDTVHTVILDEADEMLNMGFIEDIESILASTPEERQTLL
FSATMPGPIQRMAEKFMKDPQIVRVKTKEMTVPLIEQYYLEVQERNKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALTQRGYTAEGIHGDLSQAKRLSVLRKFKEGTIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFITPREKSYLAVVEKTTK
RKMEKMKAPTLDEALEGQQRAVVDKITQTIESNNLHYYKAAADELLEANDAATVVAAVLK
MLTKEPDTTPVKLTEESPLPQKRDRKQFDRGDRRRRDDSRGGYNDRRKKAPVKPRSGEKR
TSSKSSKPRSYNHQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaagtttcaagacttaggcattagccaagctacgttaaaagctgttctcaaaatg
ggctttgaggaagcaacaccaatccaggcagaaacaattccattgagcctagaaaataaa
gatttgatcggccaggcgcaaacaggaactggtaaaacagctgcattcggtattccattg
gtggaaaaagtggatatgaaattagatgctatccaagggattattattgcgccaacgcgt
gaattggcgattcaagtatctgaagaattatacaaaataggtgccggcaaaagagtgcgt
gtactcccaatttacggagggcaggatatcagccgtcaaatccgttcacttaagaaagcc
ccacatattatcgtaggtactccaggacgtgtattagaccatatcaatagaaagaccatg
cgtcttgacactgttcatacggtaatccttgatgaagcagatgaaatgttaaacatgggc
tttattgaagacattgaatcaatccttgcttcaacaccggaagaacgccaaacattactt
ttctcagccaccatgccgggaccaattcagagaatggctgaaaagttcatgaaggatccc
caaattgttcgtgtgaaaacaaaagaaatgactgttcctttgattgagcagtattatctt
gaagtgcaagagcgaaataaatttgatgtgttaacaagacttttggatattcaatcacct
gagcttgcgattgtatttggccggacgaagcgtcgtgtggatgagttatccgaggcatta
acacaaagaggatatacggcagaaggaattcatggcgatttaagccaggcaaagcgttta
tctgttttacgtaagtttaaagaaggaacgattgatgtccttgttgcaacagacgtagcc
gcaaggggtctcgatatttccggagttacccatgtgtataactttgatattccacaggat
cctgaaagctatgtccaccggattggccgtacaggccgtgccggcaaaacaggtgtagcg
atgactttcattacaccacgtgaaaaatcctatcttgctgttgttgaaaaaacaacaaag
cggaagatggaaaaaatgaaggcaccgacacttgatgaggcattagaaggccagcagcgt
gcggtagtggataaaattacgcaaactattgagtctaacaaccttcattattacaaagcg
gcagcagatgaattgttggaagctaacgatgctgcaacggttgtggctgcagtcttaaaa
atgttaacaaaagaaccggatacgactcctgttaaattgacggaagaatcaccactgcca
caaaagagagatagaaaacagtttgatcgtggtgaccgcagaagaagagacgattcccgc
ggcggctataacgatcgtcgcaaaaaagcaccggtaaagccaagaagcggtgaaaaaaga
accagcagcaaatcatcaaaaccaagaagctataaccatcaataa
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