Bacillus sp. S3: FAY30_07310
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Entry
FAY30_07310 CDS
T08283
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
baca
Bacillus sp. S3
Brite
KEGG Orthology (KO) [BR:
baca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baca03400
]
FAY30_07310 (addB)
Enzymes [BR:
baca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAY30_07310 (addB)
DNA repair and recombination proteins [BR:
baca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FAY30_07310 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
KIX
DEAD
DUF7658
KIX_2
Motif
Other DBs
NCBI-ProteinID:
QCJ41707
LinkDB
All DBs
Position
1533328..1536825
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AA seq
1165 aa
AA seq
DB search
MAVRMVIGRSGSGKTTMFLEEILGSLAESPEGTPIIYIVPEQMTFLSEYRLAANSEVGGM
IRAQVFSFPRLAWRILQETGGISRTHLSSVGMNMLIRKIIDEQKENLKIFQRAADKNGFI
QQLEQMIIEFKRYCLKPEELIQESVKFGLGNTSDAKALNDKLKDLELIYSKFEDEIFDKY
IDSEDYFRLLAEKISVSAFLKEAEIYIDGFYSFTPQEYLVLAELMKHCKRVSIAMTTDRL
FLDSAPDELDLFRASGETCYNVYDLARTNGCVLEQPIMLKEQKKWNQPALAHLEGEFDAR
PAIAFHGTTAIQISQAVNRRAEIEGIAREIRDVVRKKGYRYREVALLIRNGGDYHEIVEP
VFDDYQIPYFIDQKRTMLNHPLIELIRSSLEVINTYWRYEPVFRAIKTELLYPLQENPDK
MREKMDRLENYCLAYGISGSKWVNKDRWIYRRIRGLELTGNVQTDAEKAMEQELNELKLM
VTAPILRLSRRVKKADTGRKLCEAVYLYLEELDIPDKLEKWKIAAEEKGNLVRMREHEQV
WNAVVELLDQYVEILGEEQVTLKTFSAILQAGFDSLNFSLIPPALDQVLIGDLEKSRLNE
IKIVFVVGVNEGVLPAKISDEGILADEDRELLLAAGIDVAPSSRTRLLDENFLAYKAFTA
PSDMLYVSYPLANDEGKALISSSYIKRLKDMFPEAGEGYYVTDPADVEESRQLSFVSNFT
TTLSYLNTQLQWKKRNYPISNLWWDVYNFYLGSTWKSKAQKVLSSLYYSNSAIQLSKEVA
DELYGETIQASVSRMELYNGCAFSHFAQHGLKLRERQIFRLEAPDIGELFHAALKQIADI
VNEQNMSWSELTRKQCEDLSKEAIKTLAPRLQNEILLSSERHHYITRKLEQIITRASLVL
SEHAKVSGFSPIGLELGFGPNGDLPPLAFSLKNGKRMELAGRIDRVDQAKAEDDSVFLRV
IDYKSSEKDVNLTEVYYGLALQMLTYLDIVITHSNELVEMKASPAGVLYFHVHNPFINAK
KMLTIDEIEKEMMKKFKMNGLMLSDQRVIQLMDQTLESGDSQIVAAGIKKDGNLSKKSKV
ASLEEFDRLRYHVRELYQKTGNAIIEGQIDIAPYKLKDKTPCTFCSFKSVCQFDESIESN
RYRMLTPHSKEDILALIRKEAEENE
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttggcggtaagaatggtaattggacggtccgggagcggaaaaacaacgatgtttctcgag
gaaatacttggaagtctcgcggaatccccagaaggcacacccataatttatatcgtacct
gagcaaatgacgtttttatctgaataccgtttagccgcaaattcagaagtaggcggaatg
atacgtgcgcaggtgttcagctttccccgtttggcatggcgaattctgcaggaaacaggc
gggattagccgtacccatttaagcagtgtcggaatgaatatgctaattcgtaagatcatt
gacgagcagaaagagaatttaaagatttttcaacgtgcggctgataagaatggttttatt
cagcagctggaacaaatgattattgaatttaagcggtactgtcttaaaccagaagaactt
attcaagaatcagttaagtttggattagggaacacgtctgatgcaaaagcactgaatgat
aaattaaaagatttagaattgatttattcaaaatttgaggacgaaatctttgacaaatat
attgattcagaagactatttccgcctgttagcagagaaaatatcagtctctgcattctta
aaagaggcagaaatctacatcgacgggttttatagcttcactccgcaagagtatctcgta
ttggcggaattaatgaagcattgtaaacgtgtttctattgcgatgaccacggatcggtta
tttttagactcagcccctgacgagcttgacttgttccgggcctctggtgaaacatgttac
aacgtctatgatttagccagaacaaacggctgtgttcttgaacagcctattatgctaaaa
gaacaaaaaaaatggaatcagccggcgctcgctcatttagagggcgaatttgatgcacgg
ccagccatagcgtttcatggtacgacagcaattcaaatcagccaggcagtcaatcgaagg
gctgaaattgaagggattgcaagggaaattcgcgatgtggtccgaaaaaaagggtaccgc
taccgggaagttgccctcttaattagaaatggcggggattatcatgaaatcgttgaaccg
gtttttgacgattatcagattccttattttatcgaccagaaaaggacgatgctcaatcac
cctcttatcgaattgattcgctccagtcttgaagtaattaacacttattggcgctatgaa
ccagtatttagagcgataaaaaccgaattattatatccccttcaggaaaatccagacaaa
atgcgcgagaagatggacaggctggaaaactattgtttagcttacgggattagtggcagc
aaatgggtgaacaaggatcgctggatttaccgacggataagagggctggaattaacaggg
aatgtccaaaccgatgctgaaaaagcgatggaacaggaattgaatgaattaaagcttatg
gtgactgcgccaatattacgtttgtcaaggagagtgaaaaaagctgatacaggacgtaag
ctttgtgaagccgtctatttatatttagaagaattagatattccggataagctcgaaaaa
tggaaaatagctgctgaagaaaaaggcaatctggtaaggatgagggaacatgagcaagtg
tggaatgcagttgttgaacttctagaccagtatgttgaaatactcggggaagaacaggtc
acactaaagacattttctgctattttacaggccggcttcgattcactaaatttctcgctt
attccccctgcacttgatcaggttctaattggtgatttggagaaatcaaggctgaatgag
atcaaaattgttttcgtagttggtgtcaatgaaggggtattgcctgcgaaaatttctgac
gaaggcattctggctgacgaagacagggagttgctattggcagctggcatcgatgttgca
ccaagcagccgaacacggctcttggatgaaaattttcttgcctataaagcttttacggca
ccatctgacatgctttatgtcagctatccgcttgccaatgatgaaggaaaagcattaatt
tcttcgtcatacattaagcggcttaaggatatgttccctgaagcaggtgaggggtattac
gttacagaccctgccgatgtggaggaatcaaggcaattaagttttgtgtcaaacttcaca
acaaccttgtcctatcttaacacacagctgcaatggaaaaagcggaattatccaatttct
aatctgtggtgggatgtgtataacttttacctcggaagcacttggaaaagcaaggcgcaa
aaagtgttgtcaagcctttattactcaaacagtgccattcagctttctaaggaggttgcc
gatgaattatatggtgagacaatccaggcgagtgtttcaagaatggaattatataatggc
tgtgccttttctcattttgcccagcatggactgaagcttcgtgaacggcaaatatttcga
ttggaggctccagacattggcgaattattccacgctgctttaaagcagattgccgacatt
gtcaatgaacaaaatatgtcctggtccgagttaacccgtaagcaatgtgaagacctttcc
aaagaggctatcaagacattagcaccaaggctgcaaaacgaaattttgctcagctcggaa
cgccatcattatattacgcggaaattagaacaaattattactcgtgcatcgcttgtttta
agtgagcatgcgaaagtgagcggattttcaccgattggcttagaattagggtttggccct
aatggtgacctgcccccattagccttttcattaaagaatggaaaaagaatggaattagcg
gggcgtattgacagggtcgatcaagcaaaagcggaagatgacagtgtctttttgcgggta
attgattataaatcgagtgagaaggatgtcaatttaactgaggtctattatggtcttgcc
ctgcaaatgctgacctatcttgatattgtcattactcattccaatgaattagtagagatg
aaagcgagtccagcaggtgtcctttatttccatgttcacaatccatttattaatgcaaaa
aaaatgttaaccatagatgaaatcgaaaaagaaatgatgaaaaaatttaaaatgaatgga
ttaatgcttagtgatcaaagggtcatccaattaatggatcaaacgctggaatccggagac
tctcaaattgtagcggcagggatcaagaaagatggaaacttatctaaaaaatcaaaggta
gcaagtttagaagaatttgatcgtttacgctatcatgtccgcgaactataccagaaaaca
ggtaatgccattattgaaggacaaatcgatatcgccccatataagctaaaggacaagaca
ccatgtacattttgctcctttaaatcggtatgccaatttgatgaatcgattgaaagtaat
cgttatcggatgctgacaccgcattcgaaggaagatattttggcgttaattagaaaggag
gcagaggagaatgagtaa
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integrated database retrieval system
