Bacillus sp. S3: FAY30_17165
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Entry
FAY30_17165 CDS
T08283
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
baca
Bacillus sp. S3
Pathway
baca02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
baca00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FAY30_17165 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baca03021
]
FAY30_17165 (rpoD)
Transcription machinery [BR:
baca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FAY30_17165 (rpoD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
G_path_suppress
Motif
Other DBs
NCBI-ProteinID:
QCJ43498
LinkDB
All DBs
Position
complement(3530937..3532064)
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AA seq
375 aa
AA seq
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MAAEKSARSKEVENELTLEQVKDQLTELGKKIGVLAYDDIAEKLANFELESEQMDEFLEF
LGDQGIELVGDNDEDPDDKKIAKEDDEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLS
AEEEIKLANRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRE
PTPEEIGEDMDLTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaaaaatcagcccgttcaaaagaggttgaaaatgaattaacccttgaacaa
gtaaaagaccagttaactgagctgggtaaaaaaatcggtgtccttgcctatgatgatatt
gcggaaaagcttgctaattttgaattagagtctgagcaaatggatgaattcttagaattt
ctaggtgatcaaggaatcgaattggtcggagataatgacgaggatccggatgataaaaaa
attgcaaaagaagatgacgaagaatttgatttaaatgatcttagcgtgcctcctggagtt
aagataaatgatccagttcgtatgtacttaaaagaaatcggccgtgtagacctgctgtct
gctgaagaagaaattaaactggccaaccggattgaagaaggcgacgaagaagctaagcga
cgtcttgctgaagcaaacctccgccttgttgttagtattgccaagcgctatgtgggccgt
ggaatgctatttcttgatttgattcaagaaggtaatatgggtctaatcaaggcagttgag
aaatttgattaccgaaaaggtttcaaattcagtacgtacgcgacctggtggattcgacag
gcgattactcgtgcaattgcagaccaagcaagaacgattcgaattccagtgcatatggtt
gaaacgattaataaactgattcgtgttcagcgtcaattacttcaagacctcggccgcgaa
ccaacacctgaagaaattggcgaagatatggatttaacccctgataaggttagggaaatt
ttaaaaattgcccaagaacctgtctcacttgaaacaccgattggtgaagaagatgattca
catcttggggattttatcgaagatcaagatgcaacctcaccatctgaacatgctgcctat
gagttattaaaggagcagctggaagatgtgcttgatactttaactgatcgcgaagaaaat
gttcttcgcctgcgttttggactggatgatggccgcacccgcacactagaagaggtgggc
aaagttttcggcgtaacacgagaacgtattcgccaaatcgaagcgaaggcattgcgtaaa
ttacgtcatccaagccgcagcaaacgcctaaaagatttcttagaatag
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