Bacillus sp. S3: FAY30_17340
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Entry
FAY30_17340 CDS
T08283
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
baca
Bacillus sp. S3
Pathway
baca03030
DNA replication
baca03430
Mismatch repair
baca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAY30_17340 (holA)
03430 Mismatch repair
FAY30_17340 (holA)
03440 Homologous recombination
FAY30_17340 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baca03032
]
FAY30_17340 (holA)
03400 DNA repair and recombination proteins [BR:
baca03400
]
FAY30_17340 (holA)
Enzymes [BR:
baca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAY30_17340 (holA)
DNA replication proteins [BR:
baca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAY30_17340 (holA)
DNA repair and recombination proteins [BR:
baca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAY30_17340 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DUF1848
Motif
Other DBs
NCBI-ProteinID:
QCJ43532
LinkDB
All DBs
Position
complement(3565682..3566698)
Genome browser
AA seq
338 aa
AA seq
DB search
MVVDIWRKIKKKEIAPIYLLYGTEAFLINETKQLLLSHILNEDEKDFNFSAYDLEETPVD
VALEDAETFPFLGERKVIFLHNPAFLTAEKSKEKVDHNLTKFEAYLKEPAPYTVMVISAP
YEKLDERKKITKELKRNAEIVEAKKLSEHELKKWVAERAKSSGIEFEAIAIDQLLALVGT
NMFMIAGEVDKLSLYAAEEKRVDAALVDNLVARSLEQNIFTLIEKVVQRRLDEALRIYYD
LLKQNEEPIKILALLAGQFRLIYQVKELSRRGYGQQQIAGYLKTHPFRVKLALGQAGKFS
DEELSNLMKLLADADYQMKTGGMNKSLLIEMLLFRMKK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggtagtagatatttggagaaaaattaaaaaaaaggaaattgctcctatttatttatta
tatggaacagaggcatttttaatcaatgaaacgaaacaattactgcttagccatatttta
aacgaagacgaaaaggattttaatttttctgcgtatgatttagaggaaacacctgttgat
gtggcattagaggatgccgaaacctttccatttttaggggaacggaaagttatttttcta
cataatcccgcgtttttaaccgctgaaaaatcgaaagaaaaagtcgatcacaatttaaca
aaatttgaagcgtatctaaaagagcctgctccatatacggtaatggttatttcagctcct
tatgaaaaattagacgaacgaaaaaagattactaaggaattgaaaaggaacgccgaaata
gtcgaggccaaaaaattatctgaacatgaattaaagaaatgggtagcagagcgggcaaaa
agcagtgggattgaattcgaagcaattgcgattgatcaactgcttgcactggtgggcaca
aatatgtttatgattgcaggcgaagtggacaaattgtccttatatgctgctgaggaaaaa
cgagtcgatgctgccttggttgacaaccttgtagccaggtcgcttgagcaaaatattttt
accctgattgaaaaagtagttcagcgaagattagacgaggcactgcgaatttattatgat
ttgttaaagcaaaatgaagaacccattaagattttagcgttgcttgcaggacaatttagg
ctgatctatcaagtgaaggagctttcaagaaggggctatggacagcagcaaatagcaggt
tacttgaaaacgcacccgttcagggtcaagctcgcacttgggcaagctggtaaatttagt
gatgaagaattatcaaacctcatgaagcttcttgctgatgcggattatcaaatgaaaacc
ggcggaatgaataaatcattattaatagaaatgttattgtttcggatgaagaaataa
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