Bacillus sp. BH072: OY17_01770
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Entry
OY17_01770 CDS
T03582
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bacb
Bacillus sp. BH072
Pathway
bacb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OY17_01770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacb03019
]
OY17_01770
03009 Ribosome biogenesis [BR:
bacb03009
]
OY17_01770
Enzymes [BR:
bacb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OY17_01770
Messenger RNA biogenesis [BR:
bacb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OY17_01770
Ribosome biogenesis [BR:
bacb03009
]
Prokaryotic type
rRNA helicases
OY17_01770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
SWI2_SNF2
UvrD-helicase
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AJE76923
UniProt:
A0A806QDJ8
LinkDB
All DBs
Position
complement(347034..348473)
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AA seq
479 aa
AA seq
DB search
MNEFNEYAISPEIRRALNGLQYTEPTEVQRRVIPAALQKKDLVVKSQTGSGKTAAFGIPI
CELAEWEENKPQALILTPTRELAAQIKEDITNIGRFKRIKATAVFGKASFDKQKTELKQK
SHVIAGTPGRVLDHIEKGTLPLERLAYVVIDEADEMLNMGFIEQVEAIIQHLPKNRVTML
FSATLPDDVEKLSRTYMKDPELIEVKAEGLTTKDIEHFVTRTEEEDKSSLLRDVLITENP
DSCIIFCRTKERVIQLTDELDRLGYPCDKIHGGMVQEDRFDVMNEFKRGEFRYLIATDVA
ARGIDIENISLVINYDIPLEKESYVHRTGRTGRAGHRGRAVTFVTPSESRFLNDIETYIG
FRIQKREAPSEKETAERKAAFAEKLNARPDVKTDKSEQLNKDIMKLYFNGGKKKKLRAVD
FVGTIAKIDGVSADDIGIITILDNASYVEILNGKGPHVLDIMKNTTVKGKKLKVHKAKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtttaatgaatatgcgatcagccccgagatccgacgggcgctgaatggcttg
caatacaccgagccgactgaagtgcagcggcgcgtcatccccgccgcgctgcaaaaaaaa
gatctcgtcgtcaaatcgcagacgggcagcggcaaaaccgcggctttcggcattccgatc
tgtgagctggcggaatgggaggaaaacaaaccgcaggccctgattttaacgccgacccgc
gagcttgcggcgcagattaaagaagatatcacgaatatcggccgtttcaaacggataaaa
gccacggcggttttcggaaaagcttcttttgacaaacagaaaaccgaactgaagcaaaaa
agccacgtcattgccggaacgccggggcgtgtgcttgatcatatagagaaagggacgctg
ccgcttgaacggctggcgtatgtggtgattgacgaagcggatgaaatgctgaatatggga
tttattgaacaggtggaagccatcattcagcatctgccgaaaaacagagtcaccatgctg
ttttcagcgacactgccggatgacgtcgagaagctgagccgcacatatatgaaagaccct
gaattgattgaagtaaaagcggaaggcctgacgacaaaagacattgagcattttgtcacc
agaacagaagaagaggataaatcatcattgctgcgtgatgtcctgatcaccgaaaacccg
gacagctgcatcatattctgccggacaaaagaaagagtcatccagttaaccgatgagctg
gacaggctgggctacccttgcgataaaattcacggcggaatggtgcaggaagaccgcttt
gacgtcatgaatgaattcaagcgcggcgagttccgctatctcattgcgaccgacgttgcc
gccagaggaattgatattgaaaacatcagcctcgtcatcaattatgatattccgcttgaa
aaagaaagctatgtgcaccgcaccggcagaacgggccgcgccggacaccgcggacgggcc
gtcacgtttgtgacaccgtctgaatcgcggtttctgaatgacattgagacatatatcggt
ttccgcatccagaagcgggaggcgccgtctgagaaagaaacagcggaacggaaagcggct
tttgcggaaaaactgaacgcccgccccgatgtcaaaacagacaaaagcgaacagttaaac
aaagacatcatgaagctgtactttaacggcgggaaaaagaaaaaactcagagcggtcgat
tttgtcggaacgattgcgaaaatcgacggcgtttcagccgatgatatcgggattatcacg
attttggacaacgcatcgtacgtcgaaattctgaacggcaaaggcccgcacgttcttgac
atcatgaaaaatacgacggtcaaaggcaaaaaactgaaagtccataaagccaagaaataa
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